Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CPNE3O75131 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.14■□□□□ 0.01
CPNE3O75131 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC15.14■□□□□ 0.01
CPNE3O75131 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.14■□□□□ 0.01
CPNE3O75131 RRP7BP-205ENST00000566851 833 ntBASIC15.14■□□□□ 0.01
CPNE3O75131 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.14■□□□□ 0.01
CPNE3O75131 AC093726.1-201ENST00000608064 963 ntBASIC15.14■□□□□ 0.01
CPNE3O75131 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.14■□□□□ 0.01
CPNE3O75131 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
CPNE3O75131 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.14■□□□□ 0.01
CPNE3O75131 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CPNE3O75131 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CPNE3O75131 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CPNE3O75131 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.14■□□□□ 0.01
CPNE3O75131 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.14■□□□□ 0.01
CPNE3O75131 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CPNE3O75131 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CPNE3O75131 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE3O75131 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE3O75131 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE3O75131 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE3O75131 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE3O75131 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE3O75131 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.13■□□□□ 0.01
CPNE3O75131 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CPNE3O75131 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE3O75131 ME2P1-201ENST00000426028 1970 ntBASIC15.13■□□□□ 0.01
CPNE3O75131 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CPNE3O75131 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE3O75131 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE3O75131 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE3O75131 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE3O75131 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE3O75131 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.13■□□□□ 0.01
CPNE3O75131 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE3O75131 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE3O75131 OR8S1-201ENST00000310194 1080 ntBASIC15.13■□□□□ 0.01
CPNE3O75131 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CPNE3O75131 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE3O75131 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE3O75131 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.13■□□□□ 0.01
CPNE3O75131 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE3O75131 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE3O75131 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE3O75131 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.13■□□□□ 0.01
CPNE3O75131 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE3O75131 MYCLP2-201ENST00000449268 967 ntBASIC15.13■□□□□ 0.01
CPNE3O75131 MEIS3P1-201ENST00000495167 958 ntBASIC15.13■□□□□ 0.01
CPNE3O75131 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.13■□□□□ 0.01
CPNE3O75131 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.13■□□□□ 0.01
CPNE3O75131 AC123567.1-201ENST00000548294 1261 ntBASIC15.13■□□□□ 0.01
CPNE3O75131 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.13■□□□□ 0.01
CPNE3O75131 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE3O75131 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
CPNE3O75131 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE3O75131 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CPNE3O75131 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE3O75131 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE3O75131 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CPNE3O75131 AC092364.2-201ENST00000596710 2692 ntBASIC15.13■□□□□ 0.01
CPNE3O75131 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
CPNE3O75131 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE3O75131 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE3O75131 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CPNE3O75131 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE3O75131 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE3O75131 Z97205.2-201ENST00000564697 1639 ntBASIC15.13■□□□□ 0.01
CPNE3O75131 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.13■□□□□ 0.01
CPNE3O75131 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.13■□□□□ 0.01
CPNE3O75131 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE3O75131 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CPNE3O75131 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE3O75131 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE3O75131 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
CPNE3O75131 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC15.12■□□□□ 0.01
CPNE3O75131 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE3O75131 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE3O75131 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE3O75131 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE3O75131 AC092384.3-202ENST00000564646 2873 ntBASIC15.12■□□□□ 0.01
CPNE3O75131 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
CPNE3O75131 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.12■□□□□ 0.01
CPNE3O75131 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.12■□□□□ 0.01
CPNE3O75131 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE3O75131 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE3O75131 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE3O75131 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.12■□□□□ 0.01
CPNE3O75131 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.12■□□□□ 0.01
CPNE3O75131 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE3O75131 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC15.12■□□□□ 0.01
CPNE3O75131 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CPNE3O75131 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.12■□□□□ 0.01
CPNE3O75131 AL512384.1-201ENST00000406683 331 ntBASIC15.12■□□□□ 0.01
CPNE3O75131 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE3O75131 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.12■□□□□ 0.01
CPNE3O75131 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
CPNE3O75131 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE3O75131 INE1-201ENST00000456273 945 ntBASIC15.12■□□□□ 0.01
CPNE3O75131 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CPNE3O75131 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms