Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
MSH5O43196 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC22.05■■□□□ 1.12
MSH5O43196 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC22.05■■□□□ 1.12
MSH5O43196 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
MSH5O43196 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC22.05■■□□□ 1.12
MSH5O43196 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
MSH5O43196 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
MSH5O43196 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC22.05■■□□□ 1.12
MSH5O43196 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
MSH5O43196 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
MSH5O43196 AC009336.1-201ENST00000608941 1553 ntBASIC22.05■■□□□ 1.12
MSH5O43196 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
MSH5O43196 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
MSH5O43196 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
MSH5O43196 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
MSH5O43196 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
MSH5O43196 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
MSH5O43196 FGF1-206ENST00000407758 759 ntTSL 5 BASIC22.05■■□□□ 1.12
MSH5O43196 FALEC-201ENST00000416894 566 ntTSL 3 BASIC22.05■■□□□ 1.12
MSH5O43196 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC22.05■■□□□ 1.12
MSH5O43196 AC016907.1-201ENST00000419483 435 ntBASIC22.05■■□□□ 1.12
MSH5O43196 FAM58DP-201ENST00000428076 619 ntBASIC22.05■■□□□ 1.12
MSH5O43196 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC22.05■■□□□ 1.12
MSH5O43196 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
MSH5O43196 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC22.05■■□□□ 1.12
MSH5O43196 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC22.05■■□□□ 1.12
MSH5O43196 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC22.05■■□□□ 1.12
MSH5O43196 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC22.05■■□□□ 1.12
MSH5O43196 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
MSH5O43196 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC22.05■■□□□ 1.12
MSH5O43196 AC083760.1-201ENST00000589621 670 ntBASIC22.05■■□□□ 1.12
MSH5O43196 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC22.05■■□□□ 1.12
MSH5O43196 AL035417.2-201ENST00000603887 796 ntBASIC22.05■■□□□ 1.12
MSH5O43196 AC010680.5-201ENST00000605021 463 ntBASIC22.05■■□□□ 1.12
MSH5O43196 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC22.05■■□□□ 1.12
MSH5O43196 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
MSH5O43196 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
MSH5O43196 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC22.05■■□□□ 1.12
MSH5O43196 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
MSH5O43196 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
MSH5O43196 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
MSH5O43196 AC093010.1-201ENST00000473625 1624 ntBASIC22.05■■□□□ 1.12
MSH5O43196 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC22.05■■□□□ 1.12
MSH5O43196 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
MSH5O43196 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC22.05■■□□□ 1.12
MSH5O43196 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
MSH5O43196 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
MSH5O43196 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
MSH5O43196 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
MSH5O43196 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
MSH5O43196 AL513523.2-202ENST00000427283 2040 ntBASIC22.04■■□□□ 1.12
MSH5O43196 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
MSH5O43196 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC22.04■■□□□ 1.12
MSH5O43196 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
MSH5O43196 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
MSH5O43196 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
MSH5O43196 AC006333.1-204ENST00000429396 648 ntTSL 3 BASIC22.04■■□□□ 1.12
MSH5O43196 MTCYBP12-201ENST00000440559 1134 ntBASIC22.04■■□□□ 1.12
MSH5O43196 PGM5P3-AS1-202ENST00000442069 615 ntTSL 2 BASIC22.04■■□□□ 1.12
MSH5O43196 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC22.04■■□□□ 1.12
MSH5O43196 AC006153.1-201ENST00000480135 371 ntTSL 3 BASIC22.04■■□□□ 1.12
MSH5O43196 AC079140.1-201ENST00000508039 487 ntBASIC22.04■■□□□ 1.12
MSH5O43196 PRELID3BP5-201ENST00000508612 460 ntBASIC22.04■■□□□ 1.12
MSH5O43196 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC22.04■■□□□ 1.12
MSH5O43196 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC22.04■■□□□ 1.12
MSH5O43196 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC22.04■■□□□ 1.12
MSH5O43196 GMCL1P2-201ENST00000605230 823 ntBASIC22.04■■□□□ 1.12
MSH5O43196 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC22.04■■□□□ 1.12
MSH5O43196 VN1R74P-201ENST00000613259 503 ntBASIC22.04■■□□□ 1.12
MSH5O43196 AC121761.2-201ENST00000617300 689 ntBASIC22.04■■□□□ 1.12
MSH5O43196 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC22.04■■□□□ 1.12
MSH5O43196 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC22.04■■□□□ 1.12
MSH5O43196 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
MSH5O43196 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC22.04■■□□□ 1.12
MSH5O43196 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
MSH5O43196 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
MSH5O43196 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
MSH5O43196 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
MSH5O43196 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
MSH5O43196 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC22.03■■□□□ 1.12
MSH5O43196 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
MSH5O43196 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC22.03■■□□□ 1.12
MSH5O43196 MTND4P8-201ENST00000514997 1362 ntBASIC22.03■■□□□ 1.12
MSH5O43196 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC22.03■■□□□ 1.12
MSH5O43196 ANKRD7-201ENST00000265224 1298 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
MSH5O43196 OR8S1-201ENST00000310194 1080 ntBASIC22.03■■□□□ 1.12
MSH5O43196 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC22.03■■□□□ 1.12
MSH5O43196 ANKRD7-202ENST00000417525 1242 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
MSH5O43196 AL133325.2-201ENST00000431034 449 ntTSL 2 BASIC22.03■■□□□ 1.12
MSH5O43196 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC22.03■■□□□ 1.12
MSH5O43196 LINC01468-202ENST00000435813 975 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
MSH5O43196 RBPMS2P1-201ENST00000437762 623 ntBASIC22.03■■□□□ 1.12
MSH5O43196 AC096536.1-203ENST00000455380 515 ntTSL 5 BASIC22.03■■□□□ 1.12
MSH5O43196 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC22.03■■□□□ 1.12
MSH5O43196 AC004969.1-201ENST00000471553 578 ntTSL 5 BASIC22.03■■□□□ 1.12
MSH5O43196 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC22.03■■□□□ 1.12
MSH5O43196 MEIS3P1-201ENST00000495167 958 ntBASIC22.03■■□□□ 1.12
MSH5O43196 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC22.03■■□□□ 1.12
MSH5O43196 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC22.03■■□□□ 1.12
MSH5O43196 IGHVIII-5-2-201ENST00000522505 261 ntBASIC22.03■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms