Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHL1O00533 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHL1O00533 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CHL1O00533 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC19.94■□□□□ 0.78
CHL1O00533 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHL1O00533 AC148477.4-201ENST00000613430 1793 ntBASIC19.94■□□□□ 0.78
CHL1O00533 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CHL1O00533 RNU1-114P-201ENST00000365297 166 ntBASIC19.94■□□□□ 0.78
CHL1O00533 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
CHL1O00533 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CHL1O00533 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC19.94■□□□□ 0.78
CHL1O00533 ATP5G2P4-201ENST00000442175 420 ntBASIC19.94■□□□□ 0.78
CHL1O00533 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC19.94■□□□□ 0.78
CHL1O00533 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC19.94■□□□□ 0.78
CHL1O00533 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC19.94■□□□□ 0.78
CHL1O00533 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CHL1O00533 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC19.94■□□□□ 0.78
CHL1O00533 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC19.94■□□□□ 0.78
CHL1O00533 INO80C-210ENST00000590757 595 ntTSL 2 BASIC19.94■□□□□ 0.78
CHL1O00533 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHL1O00533 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC19.94■□□□□ 0.78
CHL1O00533 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC19.94■□□□□ 0.78
CHL1O00533 MIR6775-201ENST00000617557 69 ntBASIC19.94■□□□□ 0.78
CHL1O00533 HADH-212ENST00000638621 741 ntTSL 5 BASIC19.94■□□□□ 0.78
CHL1O00533 AC008741.2-201ENST00000612792 3115 ntBASIC19.94■□□□□ 0.78
CHL1O00533 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHL1O00533 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CHL1O00533 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
CHL1O00533 AL158070.2-201ENST00000623713 1621 ntBASIC19.94■□□□□ 0.78
CHL1O00533 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC19.94■□□□□ 0.78
CHL1O00533 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHL1O00533 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC19.94■□□□□ 0.78
CHL1O00533 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CHL1O00533 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHL1O00533 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHL1O00533 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CHL1O00533 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
CHL1O00533 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHL1O00533 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHL1O00533 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHL1O00533 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CHL1O00533 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC19.93■□□□□ 0.78
CHL1O00533 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CHL1O00533 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHL1O00533 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CHL1O00533 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CHL1O00533 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHL1O00533 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
CHL1O00533 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHL1O00533 KLF2P2-201ENST00000416807 1039 ntBASIC19.93■□□□□ 0.78
CHL1O00533 NUS1P3-201ENST00000423502 862 ntBASIC19.93■□□□□ 0.78
CHL1O00533 GHSR-202ENST00000427970 912 ntBASIC19.93■□□□□ 0.78
CHL1O00533 AC114812.1-204ENST00000449669 728 ntBASIC19.93■□□□□ 0.78
CHL1O00533 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC19.93■□□□□ 0.78
CHL1O00533 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC19.93■□□□□ 0.78
CHL1O00533 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC19.93■□□□□ 0.78
CHL1O00533 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC19.93■□□□□ 0.78
CHL1O00533 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CHL1O00533 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC19.93■□□□□ 0.78
CHL1O00533 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC19.93■□□□□ 0.78
CHL1O00533 IFT20-216ENST00000588477 774 ntTSL 5 BASIC19.93■□□□□ 0.78
CHL1O00533 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CHL1O00533 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CHL1O00533 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHL1O00533 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHL1O00533 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CHL1O00533 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHL1O00533 API5-202ENST00000420461 2009 ntTSL 2 BASIC19.93■□□□□ 0.78
CHL1O00533 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CHL1O00533 TMBIM7P-203ENST00000641617 1718 ntBASIC19.93■□□□□ 0.78
CHL1O00533 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHL1O00533 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHL1O00533 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CHL1O00533 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CHL1O00533 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHL1O00533 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHL1O00533 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHL1O00533 PDIA3P1-201ENST00000471856 1510 ntBASIC19.92■□□□□ 0.78
CHL1O00533 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHL1O00533 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC19.92■□□□□ 0.78
CHL1O00533 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CHL1O00533 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHL1O00533 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHL1O00533 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC19.92■□□□□ 0.78
CHL1O00533 AL138709.1-201ENST00000614840 1693 ntBASIC19.92■□□□□ 0.78
CHL1O00533 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHL1O00533 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC19.92■□□□□ 0.78
CHL1O00533 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
CHL1O00533 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
CHL1O00533 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CHL1O00533 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHL1O00533 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CHL1O00533 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC19.92■□□□□ 0.78
CHL1O00533 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHL1O00533 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CHL1O00533 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHL1O00533 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
CHL1O00533 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC19.91■□□□□ 0.78
CHL1O00533 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CHL1O00533 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms