Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
RHBDD3Q9Y3P4 AC022145.2-201ENST00000598203 171 ntBASIC13.82□□□□□ -0.2
RHBDD3Q9Y3P4 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC13.82□□□□□ -0.2
RHBDD3Q9Y3P4 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RHBDD3Q9Y3P4 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RHBDD3Q9Y3P4 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.82□□□□□ -0.2
RHBDD3Q9Y3P4 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RHBDD3Q9Y3P4 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RHBDD3Q9Y3P4 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RHBDD3Q9Y3P4 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RHBDD3Q9Y3P4 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC13.82□□□□□ -0.2
RHBDD3Q9Y3P4 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
RHBDD3Q9Y3P4 TPO-203ENST00000346956 2923 ntTSL 5 BASIC13.82□□□□□ -0.2
RHBDD3Q9Y3P4 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
RHBDD3Q9Y3P4 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RHBDD3Q9Y3P4 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.82□□□□□ -0.2
RHBDD3Q9Y3P4 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RHBDD3Q9Y3P4 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.82□□□□□ -0.2
RHBDD3Q9Y3P4 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RHBDD3Q9Y3P4 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
RHBDD3Q9Y3P4 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RHBDD3Q9Y3P4 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
RHBDD3Q9Y3P4 AL691432.1-201ENST00000596308 1422 ntBASIC13.81□□□□□ -0.2
RHBDD3Q9Y3P4 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RHBDD3Q9Y3P4 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
RHBDD3Q9Y3P4 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RHBDD3Q9Y3P4 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC13.81□□□□□ -0.2
RHBDD3Q9Y3P4 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
RHBDD3Q9Y3P4 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
RHBDD3Q9Y3P4 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RHBDD3Q9Y3P4 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RHBDD3Q9Y3P4 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RHBDD3Q9Y3P4 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
RHBDD3Q9Y3P4 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC13.81□□□□□ -0.2
RHBDD3Q9Y3P4 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RHBDD3Q9Y3P4 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
RHBDD3Q9Y3P4 C18orf15-201ENST00000623680 2534 ntBASIC13.81□□□□□ -0.2
RHBDD3Q9Y3P4 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RHBDD3Q9Y3P4 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RHBDD3Q9Y3P4 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
RHBDD3Q9Y3P4 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RHBDD3Q9Y3P4 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RHBDD3Q9Y3P4 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC13.81□□□□□ -0.2
RHBDD3Q9Y3P4 BX842568.4-201ENST00000421222 227 ntBASIC13.81□□□□□ -0.2
RHBDD3Q9Y3P4 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC13.81□□□□□ -0.2
RHBDD3Q9Y3P4 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC13.81□□□□□ -0.2
RHBDD3Q9Y3P4 AC005237.2-201ENST00000434368 219 ntBASIC13.81□□□□□ -0.2
RHBDD3Q9Y3P4 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RHBDD3Q9Y3P4 AC112482.1-201ENST00000492080 688 ntBASIC13.81□□□□□ -0.2
RHBDD3Q9Y3P4 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC13.81□□□□□ -0.2
RHBDD3Q9Y3P4 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
RHBDD3Q9Y3P4 AC243562.2-201ENST00000561247 970 ntBASIC13.81□□□□□ -0.2
RHBDD3Q9Y3P4 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RHBDD3Q9Y3P4 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC13.81□□□□□ -0.2
RHBDD3Q9Y3P4 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC13.81□□□□□ -0.2
RHBDD3Q9Y3P4 MIR3687-2-201ENST00000577708 61 ntBASIC13.81□□□□□ -0.2
RHBDD3Q9Y3P4 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC13.81□□□□□ -0.2
RHBDD3Q9Y3P4 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
RHBDD3Q9Y3P4 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC13.81□□□□□ -0.2
RHBDD3Q9Y3P4 AC010327.4-202ENST00000591484 748 ntBASIC13.81□□□□□ -0.2
RHBDD3Q9Y3P4 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC13.81□□□□□ -0.2
RHBDD3Q9Y3P4 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC13.81□□□□□ -0.2
RHBDD3Q9Y3P4 MIR3687-1-201ENST00000614492 61 ntBASIC13.81□□□□□ -0.2
RHBDD3Q9Y3P4 AC084121.4-201ENST00000641598 221 ntBASIC13.81□□□□□ -0.2
RHBDD3Q9Y3P4 AF228730.8-201ENST00000642140 221 ntBASIC13.81□□□□□ -0.2
RHBDD3Q9Y3P4 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RHBDD3Q9Y3P4 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RHBDD3Q9Y3P4 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RHBDD3Q9Y3P4 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.81□□□□□ -0.2
RHBDD3Q9Y3P4 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
RHBDD3Q9Y3P4 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RHBDD3Q9Y3P4 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
RHBDD3Q9Y3P4 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
RHBDD3Q9Y3P4 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
RHBDD3Q9Y3P4 TCAF2P1-201ENST00000291129 2421 ntBASIC13.81□□□□□ -0.2
RHBDD3Q9Y3P4 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
RHBDD3Q9Y3P4 AC091951.1-201ENST00000512854 2465 ntBASIC13.81□□□□□ -0.2
RHBDD3Q9Y3P4 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
RHBDD3Q9Y3P4 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
RHBDD3Q9Y3P4 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RHBDD3Q9Y3P4 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
RHBDD3Q9Y3P4 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.8□□□□□ -0.2
RHBDD3Q9Y3P4 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.8□□□□□ -0.2
RHBDD3Q9Y3P4 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RHBDD3Q9Y3P4 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
RHBDD3Q9Y3P4 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
RHBDD3Q9Y3P4 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RHBDD3Q9Y3P4 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.8□□□□□ -0.2
RHBDD3Q9Y3P4 AP3S2-216ENST00000617003 1561 ntBASIC13.8□□□□□ -0.2
RHBDD3Q9Y3P4 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC13.8□□□□□ -0.2
RHBDD3Q9Y3P4 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
RHBDD3Q9Y3P4 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RHBDD3Q9Y3P4 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.8□□□□□ -0.2
RHBDD3Q9Y3P4 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RHBDD3Q9Y3P4 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RHBDD3Q9Y3P4 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC13.8□□□□□ -0.2
RHBDD3Q9Y3P4 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC13.8□□□□□ -0.2
RHBDD3Q9Y3P4 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
RHBDD3Q9Y3P4 YBX1P5-201ENST00000509441 847 ntBASIC13.8□□□□□ -0.2
RHBDD3Q9Y3P4 CCND1-203ENST00000536559 553 ntTSL 3 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms