Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.9□□□□□ -0.02
COL21A1Q96P44 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
COL21A1Q96P44 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
COL21A1Q96P44 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
COL21A1Q96P44 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
COL21A1Q96P44 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
COL21A1Q96P44 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.9□□□□□ -0.02
COL21A1Q96P44 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
COL21A1Q96P44 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
COL21A1Q96P44 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
COL21A1Q96P44 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
COL21A1Q96P44 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.9□□□□□ -0.02
COL21A1Q96P44 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.9□□□□□ -0.02
COL21A1Q96P44 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.9□□□□□ -0.02
COL21A1Q96P44 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
COL21A1Q96P44 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.9□□□□□ -0.02
COL21A1Q96P44 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.9□□□□□ -0.02
COL21A1Q96P44 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.9□□□□□ -0.02
COL21A1Q96P44 MIR4453-201ENST00000584019 89 ntBASIC14.9□□□□□ -0.02
COL21A1Q96P44 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
COL21A1Q96P44 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.9□□□□□ -0.02
COL21A1Q96P44 AC093028.1-201ENST00000622998 982 ntBASIC14.9□□□□□ -0.02
COL21A1Q96P44 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.9□□□□□ -0.02
COL21A1Q96P44 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
COL21A1Q96P44 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
COL21A1Q96P44 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
COL21A1Q96P44 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
COL21A1Q96P44 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
COL21A1Q96P44 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
COL21A1Q96P44 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
COL21A1Q96P44 MIR600HG-201ENST00000449175 5984 ntBASIC14.9□□□□□ -0.02
COL21A1Q96P44 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
COL21A1Q96P44 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
COL21A1Q96P44 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.9□□□□□ -0.02
COL21A1Q96P44 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
COL21A1Q96P44 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.9□□□□□ -0.02
COL21A1Q96P44 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
COL21A1Q96P44 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.9□□□□□ -0.02
COL21A1Q96P44 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COL21A1Q96P44 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COL21A1Q96P44 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COL21A1Q96P44 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.89□□□□□ -0.03
COL21A1Q96P44 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
COL21A1Q96P44 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
COL21A1Q96P44 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.89□□□□□ -0.03
COL21A1Q96P44 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COL21A1Q96P44 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COL21A1Q96P44 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
COL21A1Q96P44 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
COL21A1Q96P44 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COL21A1Q96P44 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
COL21A1Q96P44 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COL21A1Q96P44 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
COL21A1Q96P44 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COL21A1Q96P44 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COL21A1Q96P44 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
COL21A1Q96P44 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COL21A1Q96P44 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COL21A1Q96P44 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
COL21A1Q96P44 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COL21A1Q96P44 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COL21A1Q96P44 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
COL21A1Q96P44 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
COL21A1Q96P44 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.89□□□□□ -0.03
COL21A1Q96P44 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.89□□□□□ -0.03
COL21A1Q96P44 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.89□□□□□ -0.03
COL21A1Q96P44 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.89□□□□□ -0.03
COL21A1Q96P44 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.89□□□□□ -0.03
COL21A1Q96P44 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.89□□□□□ -0.03
COL21A1Q96P44 AC243562.2-201ENST00000561247 970 ntBASIC14.89□□□□□ -0.03
COL21A1Q96P44 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.89□□□□□ -0.03
COL21A1Q96P44 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
COL21A1Q96P44 AC007967.4-201ENST00000614700 386 ntBASIC14.89□□□□□ -0.03
COL21A1Q96P44 Z92544.3-201ENST00000624747 417 ntBASIC14.89□□□□□ -0.03
COL21A1Q96P44 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
COL21A1Q96P44 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.89□□□□□ -0.03
COL21A1Q96P44 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COL21A1Q96P44 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.89□□□□□ -0.03
COL21A1Q96P44 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.89□□□□□ -0.03
COL21A1Q96P44 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.89□□□□□ -0.03
COL21A1Q96P44 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.89□□□□□ -0.03
COL21A1Q96P44 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
COL21A1Q96P44 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
COL21A1Q96P44 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
COL21A1Q96P44 PCDHA3-202ENST00000532566 4594 ntBASIC14.89□□□□□ -0.03
COL21A1Q96P44 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
COL21A1Q96P44 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
COL21A1Q96P44 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
COL21A1Q96P44 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
COL21A1Q96P44 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COL21A1Q96P44 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
COL21A1Q96P44 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
COL21A1Q96P44 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
COL21A1Q96P44 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
COL21A1Q96P44 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.88□□□□□ -0.03
COL21A1Q96P44 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.88□□□□□ -0.03
COL21A1Q96P44 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
COL21A1Q96P44 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
COL21A1Q96P44 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
COL21A1Q96P44 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms