Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC10.27□□□□□ -0.77
ALMS1Q8TCU4 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
ALMS1Q8TCU4 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
ALMS1Q8TCU4 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC10.27□□□□□ -0.77
ALMS1Q8TCU4 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
ALMS1Q8TCU4 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC10.27□□□□□ -0.77
ALMS1Q8TCU4 AGPAT5P1-201ENST00000455855 1019 ntBASIC10.27□□□□□ -0.77
ALMS1Q8TCU4 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC10.27□□□□□ -0.77
ALMS1Q8TCU4 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC10.27□□□□□ -0.77
ALMS1Q8TCU4 AC005962.1-201ENST00000584100 773 ntBASIC10.27□□□□□ -0.77
ALMS1Q8TCU4 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
ALMS1Q8TCU4 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC10.27□□□□□ -0.77
ALMS1Q8TCU4 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
ALMS1Q8TCU4 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
ALMS1Q8TCU4 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
ALMS1Q8TCU4 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC10.27□□□□□ -0.77
ALMS1Q8TCU4 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
ALMS1Q8TCU4 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC10.27□□□□□ -0.77
ALMS1Q8TCU4 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC10.27□□□□□ -0.77
ALMS1Q8TCU4 DGAT2L7P-201ENST00000602462 744 ntBASIC10.27□□□□□ -0.77
ALMS1Q8TCU4 AC006158.1-201ENST00000610661 249 ntBASIC10.27□□□□□ -0.77
ALMS1Q8TCU4 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
ALMS1Q8TCU4 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
ALMS1Q8TCU4 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC10.27□□□□□ -0.77
ALMS1Q8TCU4 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC10.27□□□□□ -0.77
ALMS1Q8TCU4 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
ALMS1Q8TCU4 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
ALMS1Q8TCU4 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC10.27□□□□□ -0.77
ALMS1Q8TCU4 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
ALMS1Q8TCU4 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC10.27□□□□□ -0.77
ALMS1Q8TCU4 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
ALMS1Q8TCU4 AL008718.2-201ENST00000609206 1313 ntBASIC10.26□□□□□ -0.77
ALMS1Q8TCU4 AL627231.1-201ENST00000394467 1125 ntBASIC10.26□□□□□ -0.77
ALMS1Q8TCU4 AC026434.2-201ENST00000506094 1078 ntBASIC10.26□□□□□ -0.77
ALMS1Q8TCU4 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC10.26□□□□□ -0.77
ALMS1Q8TCU4 AC005041.3-201ENST00000606287 649 ntBASIC10.26□□□□□ -0.77
ALMS1Q8TCU4 AP003392.6-201ENST00000607709 325 ntBASIC10.26□□□□□ -0.77
ALMS1Q8TCU4 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
ALMS1Q8TCU4 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
ALMS1Q8TCU4 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
ALMS1Q8TCU4 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC10.26□□□□□ -0.77
ALMS1Q8TCU4 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
ALMS1Q8TCU4 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC10.26□□□□□ -0.77
ALMS1Q8TCU4 IL9RP3-201ENST00000442856 1674 ntBASIC10.26□□□□□ -0.77
ALMS1Q8TCU4 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
ALMS1Q8TCU4 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC10.26□□□□□ -0.77
ALMS1Q8TCU4 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
ALMS1Q8TCU4 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC10.26□□□□□ -0.77
ALMS1Q8TCU4 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
ALMS1Q8TCU4 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC10.26□□□□□ -0.77
ALMS1Q8TCU4 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
ALMS1Q8TCU4 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
ALMS1Q8TCU4 AC084364.1-201ENST00000551967 1556 ntBASIC10.26□□□□□ -0.77
ALMS1Q8TCU4 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
ALMS1Q8TCU4 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC10.26□□□□□ -0.77
ALMS1Q8TCU4 HPGD-203ENST00000422112 805 ntTSL 2 BASIC10.26□□□□□ -0.77
ALMS1Q8TCU4 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
ALMS1Q8TCU4 RN7SL396P-201ENST00000471086 295 ntBASIC10.26□□□□□ -0.77
ALMS1Q8TCU4 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC10.26□□□□□ -0.77
ALMS1Q8TCU4 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
ALMS1Q8TCU4 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC10.26□□□□□ -0.77
ALMS1Q8TCU4 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
ALMS1Q8TCU4 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
ALMS1Q8TCU4 ALOX12P2-203ENST00000570921 1945 ntBASIC10.26□□□□□ -0.77
ALMS1Q8TCU4 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
ALMS1Q8TCU4 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
ALMS1Q8TCU4 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
ALMS1Q8TCU4 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC10.26□□□□□ -0.77
ALMS1Q8TCU4 CMC2-224ENST00000630396 481 ntTSL 5 BASIC10.26□□□□□ -0.77
ALMS1Q8TCU4 AC002472.4-201ENST00000641915 272 ntBASIC10.26□□□□□ -0.77
ALMS1Q8TCU4 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
ALMS1Q8TCU4 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
ALMS1Q8TCU4 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC10.26□□□□□ -0.77
ALMS1Q8TCU4 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC10.26□□□□□ -0.77
ALMS1Q8TCU4 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
ALMS1Q8TCU4 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC10.26□□□□□ -0.77
ALMS1Q8TCU4 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC10.26□□□□□ -0.77
ALMS1Q8TCU4 TUBB8P8-201ENST00000458717 1058 ntBASIC10.26□□□□□ -0.77
ALMS1Q8TCU4 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC10.26□□□□□ -0.77
ALMS1Q8TCU4 RN7SL258P-201ENST00000478664 300 ntBASIC10.26□□□□□ -0.77
ALMS1Q8TCU4 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
ALMS1Q8TCU4 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC10.26□□□□□ -0.77
ALMS1Q8TCU4 AC148477.9-201ENST00000623974 539 ntBASIC10.26□□□□□ -0.77
ALMS1Q8TCU4 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
ALMS1Q8TCU4 AC022211.2-201ENST00000585075 2527 ntBASIC10.25□□□□□ -0.77
ALMS1Q8TCU4 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC10.25□□□□□ -0.77
ALMS1Q8TCU4 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
ALMS1Q8TCU4 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
ALMS1Q8TCU4 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
ALMS1Q8TCU4 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
ALMS1Q8TCU4 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC10.25□□□□□ -0.77
ALMS1Q8TCU4 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC10.25□□□□□ -0.77
ALMS1Q8TCU4 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
ALMS1Q8TCU4 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
ALMS1Q8TCU4 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
ALMS1Q8TCU4 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
ALMS1Q8TCU4 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
ALMS1Q8TCU4 HPN-206ENST00000597419 1212 ntTSL 5 BASIC10.25□□□□□ -0.77
ALMS1Q8TCU4 AL109837.1-201ENST00000603272 613 ntBASIC10.25□□□□□ -0.77
ALMS1Q8TCU4 NAMA-206ENST00000605377 509 ntTSL 5 BASIC10.25□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms