Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 AC105250.1-201ENST00000509378 2057 ntBASIC13.77□□□□□ -0.21
CPEB3Q8NE35 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.77□□□□□ -0.21
CPEB3Q8NE35 DUT-210ENST00000559935 569 ntTSL 3 BASIC13.77□□□□□ -0.21
CPEB3Q8NE35 Z97205.2-201ENST00000564697 1639 ntBASIC13.77□□□□□ -0.21
CPEB3Q8NE35 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.77□□□□□ -0.21
CPEB3Q8NE35 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
CPEB3Q8NE35 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CPEB3Q8NE35 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CPEB3Q8NE35 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC13.77□□□□□ -0.21
CPEB3Q8NE35 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.77□□□□□ -0.21
CPEB3Q8NE35 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CPEB3Q8NE35 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CPEB3Q8NE35 AC009090.5-201ENST00000624886 2285 ntBASIC13.77□□□□□ -0.21
CPEB3Q8NE35 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CPEB3Q8NE35 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CPEB3Q8NE35 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
CPEB3Q8NE35 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CPEB3Q8NE35 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CPEB3Q8NE35 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CPEB3Q8NE35 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13.77□□□□□ -0.21
CPEB3Q8NE35 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CPEB3Q8NE35 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
CPEB3Q8NE35 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
CPEB3Q8NE35 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
CPEB3Q8NE35 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CPEB3Q8NE35 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CPEB3Q8NE35 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC13.76□□□□□ -0.21
CPEB3Q8NE35 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CPEB3Q8NE35 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.76□□□□□ -0.21
CPEB3Q8NE35 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC13.76□□□□□ -0.21
CPEB3Q8NE35 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CPEB3Q8NE35 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CPEB3Q8NE35 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CPEB3Q8NE35 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.76□□□□□ -0.21
CPEB3Q8NE35 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CPEB3Q8NE35 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CPEB3Q8NE35 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CPEB3Q8NE35 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.76□□□□□ -0.21
CPEB3Q8NE35 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC13.76□□□□□ -0.21
CPEB3Q8NE35 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC13.76□□□□□ -0.21
CPEB3Q8NE35 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CPEB3Q8NE35 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CPEB3Q8NE35 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.76□□□□□ -0.21
CPEB3Q8NE35 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CPEB3Q8NE35 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CPEB3Q8NE35 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CPEB3Q8NE35 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CPEB3Q8NE35 MBP-202ENST00000355994 2772 ntTSL 5 BASIC13.76□□□□□ -0.21
CPEB3Q8NE35 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CPEB3Q8NE35 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CPEB3Q8NE35 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CPEB3Q8NE35 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC13.76□□□□□ -0.21
CPEB3Q8NE35 SYS1-203ENST00000414310 795 ntTSL 3 BASIC13.76□□□□□ -0.21
CPEB3Q8NE35 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.76□□□□□ -0.21
CPEB3Q8NE35 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC13.76□□□□□ -0.21
CPEB3Q8NE35 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.76□□□□□ -0.21
CPEB3Q8NE35 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC13.76□□□□□ -0.21
CPEB3Q8NE35 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC13.76□□□□□ -0.21
CPEB3Q8NE35 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC13.76□□□□□ -0.21
CPEB3Q8NE35 AC044860.1-202ENST00000559481 777 ntBASIC13.76□□□□□ -0.21
CPEB3Q8NE35 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC13.76□□□□□ -0.21
CPEB3Q8NE35 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CPEB3Q8NE35 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.76□□□□□ -0.21
CPEB3Q8NE35 AL109936.8-201ENST00000641772 604 ntBASIC13.76□□□□□ -0.21
CPEB3Q8NE35 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CPEB3Q8NE35 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CPEB3Q8NE35 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CPEB3Q8NE35 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
CPEB3Q8NE35 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CPEB3Q8NE35 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CPEB3Q8NE35 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CPEB3Q8NE35 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CPEB3Q8NE35 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CPEB3Q8NE35 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC13.76□□□□□ -0.21
CPEB3Q8NE35 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CPEB3Q8NE35 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.76□□□□□ -0.21
CPEB3Q8NE35 AC020658.6-201ENST00000623564 1870 ntBASIC13.76□□□□□ -0.21
CPEB3Q8NE35 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CPEB3Q8NE35 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CPEB3Q8NE35 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CPEB3Q8NE35 ING5-213ENST00000636051 4199 ntTSL 5 BASIC13.75□□□□□ -0.21
CPEB3Q8NE35 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CPEB3Q8NE35 AMT-233ENST00000636522 1620 ntTSL 2 BASIC13.75□□□□□ -0.21
CPEB3Q8NE35 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
CPEB3Q8NE35 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CPEB3Q8NE35 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.75□□□□□ -0.21
CPEB3Q8NE35 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CPEB3Q8NE35 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC13.75□□□□□ -0.21
CPEB3Q8NE35 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CPEB3Q8NE35 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CPEB3Q8NE35 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CPEB3Q8NE35 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
CPEB3Q8NE35 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CPEB3Q8NE35 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CPEB3Q8NE35 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.75□□□□□ -0.21
CPEB3Q8NE35 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC13.75□□□□□ -0.21
CPEB3Q8NE35 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CPEB3Q8NE35 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CPEB3Q8NE35 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CPEB3Q8NE35 MIR770-201ENST00000390219 98 ntBASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms