Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ARHGEF39Q8N4T4 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ARHGEF39Q8N4T4 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ARHGEF39Q8N4T4 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.73□□□□□ -0.05
ARHGEF39Q8N4T4 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
ARHGEF39Q8N4T4 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14.73□□□□□ -0.05
ARHGEF39Q8N4T4 AC134915.1-201ENST00000426461 574 ntBASIC14.73□□□□□ -0.05
ARHGEF39Q8N4T4 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.73□□□□□ -0.05
ARHGEF39Q8N4T4 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.73□□□□□ -0.05
ARHGEF39Q8N4T4 RN7SL752P-201ENST00000463779 287 ntBASIC14.73□□□□□ -0.05
ARHGEF39Q8N4T4 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC14.73□□□□□ -0.05
ARHGEF39Q8N4T4 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.73□□□□□ -0.05
ARHGEF39Q8N4T4 AC107373.2-201ENST00000607735 490 ntBASIC14.73□□□□□ -0.05
ARHGEF39Q8N4T4 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.73□□□□□ -0.05
ARHGEF39Q8N4T4 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.73□□□□□ -0.05
ARHGEF39Q8N4T4 AL033527.5-201ENST00000641382 801 ntBASIC14.73□□□□□ -0.05
ARHGEF39Q8N4T4 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
ARHGEF39Q8N4T4 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC14.73□□□□□ -0.05
ARHGEF39Q8N4T4 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.73□□□□□ -0.05
ARHGEF39Q8N4T4 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ARHGEF39Q8N4T4 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ARHGEF39Q8N4T4 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ARHGEF39Q8N4T4 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ARHGEF39Q8N4T4 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ARHGEF39Q8N4T4 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
ARHGEF39Q8N4T4 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ARHGEF39Q8N4T4 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.73□□□□□ -0.05
ARHGEF39Q8N4T4 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
ARHGEF39Q8N4T4 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
ARHGEF39Q8N4T4 KRT8P22-201ENST00000562317 1415 ntBASIC14.73□□□□□ -0.05
ARHGEF39Q8N4T4 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ARHGEF39Q8N4T4 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.73□□□□□ -0.05
ARHGEF39Q8N4T4 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ARHGEF39Q8N4T4 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
ARHGEF39Q8N4T4 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.72□□□□□ -0.05
ARHGEF39Q8N4T4 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ARHGEF39Q8N4T4 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ARHGEF39Q8N4T4 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.72□□□□□ -0.05
ARHGEF39Q8N4T4 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.72□□□□□ -0.05
ARHGEF39Q8N4T4 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ARHGEF39Q8N4T4 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.72□□□□□ -0.05
ARHGEF39Q8N4T4 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ARHGEF39Q8N4T4 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
ARHGEF39Q8N4T4 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.72□□□□□ -0.05
ARHGEF39Q8N4T4 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ARHGEF39Q8N4T4 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
ARHGEF39Q8N4T4 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.72□□□□□ -0.05
ARHGEF39Q8N4T4 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ARHGEF39Q8N4T4 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ARHGEF39Q8N4T4 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.72□□□□□ -0.05
ARHGEF39Q8N4T4 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.72□□□□□ -0.05
ARHGEF39Q8N4T4 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.72□□□□□ -0.05
ARHGEF39Q8N4T4 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.72□□□□□ -0.05
ARHGEF39Q8N4T4 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
ARHGEF39Q8N4T4 AC132938.2-201ENST00000579188 680 ntBASIC14.72□□□□□ -0.05
ARHGEF39Q8N4T4 AC133539.2-201ENST00000604757 467 ntBASIC14.72□□□□□ -0.05
ARHGEF39Q8N4T4 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC14.72□□□□□ -0.05
ARHGEF39Q8N4T4 AL035252.4-201ENST00000624174 288 ntBASIC14.72□□□□□ -0.05
ARHGEF39Q8N4T4 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.72□□□□□ -0.05
ARHGEF39Q8N4T4 AL645728.2-202ENST00000641679 227 ntBASIC14.72□□□□□ -0.05
ARHGEF39Q8N4T4 AL591163.1-201ENST00000641757 987 ntBASIC14.72□□□□□ -0.05
ARHGEF39Q8N4T4 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ARHGEF39Q8N4T4 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ARHGEF39Q8N4T4 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.72□□□□□ -0.05
ARHGEF39Q8N4T4 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.72□□□□□ -0.05
ARHGEF39Q8N4T4 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ARHGEF39Q8N4T4 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.72□□□□□ -0.05
ARHGEF39Q8N4T4 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.72□□□□□ -0.05
ARHGEF39Q8N4T4 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
ARHGEF39Q8N4T4 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.72□□□□□ -0.05
ARHGEF39Q8N4T4 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.72□□□□□ -0.05
ARHGEF39Q8N4T4 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.72□□□□□ -0.05
ARHGEF39Q8N4T4 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.72□□□□□ -0.05
ARHGEF39Q8N4T4 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ARHGEF39Q8N4T4 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
ARHGEF39Q8N4T4 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
ARHGEF39Q8N4T4 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ARHGEF39Q8N4T4 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.71□□□□□ -0.05
ARHGEF39Q8N4T4 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ARHGEF39Q8N4T4 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.71□□□□□ -0.05
ARHGEF39Q8N4T4 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ARHGEF39Q8N4T4 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
ARHGEF39Q8N4T4 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
ARHGEF39Q8N4T4 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
ARHGEF39Q8N4T4 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ARHGEF39Q8N4T4 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
ARHGEF39Q8N4T4 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ARHGEF39Q8N4T4 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
ARHGEF39Q8N4T4 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.71□□□□□ -0.05
ARHGEF39Q8N4T4 AL512384.1-201ENST00000406683 331 ntBASIC14.71□□□□□ -0.05
ARHGEF39Q8N4T4 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.71□□□□□ -0.05
ARHGEF39Q8N4T4 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
ARHGEF39Q8N4T4 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC14.71□□□□□ -0.05
ARHGEF39Q8N4T4 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC14.71□□□□□ -0.05
ARHGEF39Q8N4T4 AC005034.1-201ENST00000426657 489 ntBASIC14.71□□□□□ -0.05
ARHGEF39Q8N4T4 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
ARHGEF39Q8N4T4 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC14.71□□□□□ -0.05
ARHGEF39Q8N4T4 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.71□□□□□ -0.05
ARHGEF39Q8N4T4 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
ARHGEF39Q8N4T4 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms