Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 ACKR1-201ENST00000368121 1240 ntBASIC16.09■□□□□ 0.17
SIX5Q8N196 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SIX5Q8N196 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC16.09■□□□□ 0.17
SIX5Q8N196 NUS1P3-201ENST00000423502 862 ntBASIC16.09■□□□□ 0.17
SIX5Q8N196 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC16.09■□□□□ 0.17
SIX5Q8N196 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC16.09■□□□□ 0.17
SIX5Q8N196 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC16.09■□□□□ 0.17
SIX5Q8N196 AC004898.1-201ENST00000451057 766 ntBASIC16.09■□□□□ 0.17
SIX5Q8N196 MPRIPP1-201ENST00000452433 1089 ntBASIC16.09■□□□□ 0.17
SIX5Q8N196 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC16.09■□□□□ 0.17
SIX5Q8N196 EIF4HP1-201ENST00000453115 687 ntBASIC16.09■□□□□ 0.17
SIX5Q8N196 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC16.09■□□□□ 0.17
SIX5Q8N196 AC091804.1-201ENST00000486888 567 ntBASIC16.09■□□□□ 0.17
SIX5Q8N196 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
SIX5Q8N196 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC16.09■□□□□ 0.17
SIX5Q8N196 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC16.09■□□□□ 0.17
SIX5Q8N196 AC104982.3-201ENST00000581995 514 ntBASIC16.09■□□□□ 0.17
SIX5Q8N196 KC6-205ENST00000599934 556 ntTSL 4 BASIC16.09■□□□□ 0.17
SIX5Q8N196 HCG18-245ENST00000602550 559 ntTSL 4 BASIC16.09■□□□□ 0.17
SIX5Q8N196 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC16.09■□□□□ 0.17
SIX5Q8N196 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.09■□□□□ 0.17
SIX5Q8N196 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SIX5Q8N196 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.09■□□□□ 0.17
SIX5Q8N196 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SIX5Q8N196 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.09■□□□□ 0.17
SIX5Q8N196 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SIX5Q8N196 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SIX5Q8N196 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SIX5Q8N196 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.09■□□□□ 0.17
SIX5Q8N196 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
SIX5Q8N196 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
SIX5Q8N196 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.17
SIX5Q8N196 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
SIX5Q8N196 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
SIX5Q8N196 AC080080.1-201ENST00000625121 2420 ntBASIC16.08■□□□□ 0.17
SIX5Q8N196 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.08■□□□□ 0.17
SIX5Q8N196 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.08■□□□□ 0.17
SIX5Q8N196 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
SIX5Q8N196 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
SIX5Q8N196 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
SIX5Q8N196 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SIX5Q8N196 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SIX5Q8N196 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
SIX5Q8N196 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SIX5Q8N196 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SIX5Q8N196 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SIX5Q8N196 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.16
SIX5Q8N196 HINT2P1-201ENST00000419438 481 ntBASIC16.08■□□□□ 0.16
SIX5Q8N196 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC16.08■□□□□ 0.16
SIX5Q8N196 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SIX5Q8N196 MTX1P1-201ENST00000440904 838 ntBASIC16.08■□□□□ 0.16
SIX5Q8N196 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.08■□□□□ 0.16
SIX5Q8N196 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC16.08■□□□□ 0.16
SIX5Q8N196 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC16.08■□□□□ 0.16
SIX5Q8N196 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.08■□□□□ 0.16
SIX5Q8N196 AC078819.1-201ENST00000547454 765 ntBASIC16.08■□□□□ 0.16
SIX5Q8N196 AC012085.1-201ENST00000548270 765 ntBASIC16.08■□□□□ 0.16
SIX5Q8N196 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC16.08■□□□□ 0.16
SIX5Q8N196 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC16.08■□□□□ 0.16
SIX5Q8N196 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.08■□□□□ 0.16
SIX5Q8N196 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.08■□□□□ 0.16
SIX5Q8N196 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC16.08■□□□□ 0.16
SIX5Q8N196 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.08■□□□□ 0.16
SIX5Q8N196 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SIX5Q8N196 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SIX5Q8N196 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SIX5Q8N196 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC16.08■□□□□ 0.16
SIX5Q8N196 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
SIX5Q8N196 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.08■□□□□ 0.16
SIX5Q8N196 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.08■□□□□ 0.16
SIX5Q8N196 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SIX5Q8N196 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SIX5Q8N196 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
SIX5Q8N196 BNIP3P1-202ENST00000550043 1585 ntBASIC16.08■□□□□ 0.16
SIX5Q8N196 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
SIX5Q8N196 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SIX5Q8N196 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
SIX5Q8N196 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SIX5Q8N196 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SIX5Q8N196 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SIX5Q8N196 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SIX5Q8N196 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
SIX5Q8N196 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.07■□□□□ 0.16
SIX5Q8N196 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.07■□□□□ 0.16
SIX5Q8N196 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SIX5Q8N196 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SIX5Q8N196 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.07■□□□□ 0.16
SIX5Q8N196 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.07■□□□□ 0.16
SIX5Q8N196 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SIX5Q8N196 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SIX5Q8N196 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SIX5Q8N196 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
SIX5Q8N196 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SIX5Q8N196 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SIX5Q8N196 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SIX5Q8N196 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SIX5Q8N196 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC16.07■□□□□ 0.16
SIX5Q8N196 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
SIX5Q8N196 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SIX5Q8N196 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms