Protein–RNA interactions for Protein: Q8IYT3

CCDC170, Coiled-coil domain-containing protein 170, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170Q8IYT3 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC170Q8IYT3 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC170Q8IYT3 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC170Q8IYT3 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.9■□□□□ 0.3
CCDC170Q8IYT3 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CCDC170Q8IYT3 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC170Q8IYT3 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC170Q8IYT3 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC170Q8IYT3 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC170Q8IYT3 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.9■□□□□ 0.3
CCDC170Q8IYT3 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC170Q8IYT3 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC170Q8IYT3 AC007967.2-201ENST00000432613 625 ntBASIC16.9■□□□□ 0.3
CCDC170Q8IYT3 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC170Q8IYT3 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CCDC170Q8IYT3 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.9■□□□□ 0.3
CCDC170Q8IYT3 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.9■□□□□ 0.3
CCDC170Q8IYT3 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.9■□□□□ 0.3
CCDC170Q8IYT3 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC170Q8IYT3 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CCDC170Q8IYT3 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC170Q8IYT3 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC170Q8IYT3 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC170Q8IYT3 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
CCDC170Q8IYT3 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC170Q8IYT3 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC170Q8IYT3 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC170Q8IYT3 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC170Q8IYT3 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CCDC170Q8IYT3 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CCDC170Q8IYT3 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CCDC170Q8IYT3 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.89■□□□□ 0.3
CCDC170Q8IYT3 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CCDC170Q8IYT3 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CCDC170Q8IYT3 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CCDC170Q8IYT3 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CCDC170Q8IYT3 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CCDC170Q8IYT3 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC16.89■□□□□ 0.29
CCDC170Q8IYT3 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC170Q8IYT3 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC170Q8IYT3 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC170Q8IYT3 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC170Q8IYT3 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC170Q8IYT3 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CCDC170Q8IYT3 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC170Q8IYT3 RN7SL589P-201ENST00000481268 310 ntBASIC16.89■□□□□ 0.29
CCDC170Q8IYT3 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.89■□□□□ 0.29
CCDC170Q8IYT3 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC170Q8IYT3 AP000842.3-202ENST00000569238 1080 ntBASIC16.89■□□□□ 0.29
CCDC170Q8IYT3 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC170Q8IYT3 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CCDC170Q8IYT3 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.89■□□□□ 0.29
CCDC170Q8IYT3 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.89■□□□□ 0.29
CCDC170Q8IYT3 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
CCDC170Q8IYT3 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CCDC170Q8IYT3 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC170Q8IYT3 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC170Q8IYT3 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC170Q8IYT3 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC170Q8IYT3 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC170Q8IYT3 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.89■□□□□ 0.29
CCDC170Q8IYT3 AL607033.1-201ENST00000623900 1599 ntBASIC16.89■□□□□ 0.29
CCDC170Q8IYT3 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CCDC170Q8IYT3 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC170Q8IYT3 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC170Q8IYT3 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC170Q8IYT3 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC170Q8IYT3 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.88■□□□□ 0.29
CCDC170Q8IYT3 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC170Q8IYT3 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CCDC170Q8IYT3 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC170Q8IYT3 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC170Q8IYT3 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CCDC170Q8IYT3 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC170Q8IYT3 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC170Q8IYT3 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CCDC170Q8IYT3 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC170Q8IYT3 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC170Q8IYT3 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC170Q8IYT3 AL450487.1-201ENST00000426799 995 ntBASIC16.88■□□□□ 0.29
CCDC170Q8IYT3 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.88■□□□□ 0.29
CCDC170Q8IYT3 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.88■□□□□ 0.29
CCDC170Q8IYT3 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.88■□□□□ 0.29
CCDC170Q8IYT3 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.88■□□□□ 0.29
CCDC170Q8IYT3 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC16.88■□□□□ 0.29
CCDC170Q8IYT3 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC16.88■□□□□ 0.29
CCDC170Q8IYT3 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CCDC170Q8IYT3 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC170Q8IYT3 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC170Q8IYT3 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC170Q8IYT3 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC170Q8IYT3 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CCDC170Q8IYT3 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC170Q8IYT3 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC170Q8IYT3 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC170Q8IYT3 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC170Q8IYT3 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC170Q8IYT3 AC005912.2-201ENST00000619492 2400 ntBASIC16.88■□□□□ 0.29
CCDC170Q8IYT3 MIR600HG-201ENST00000449175 5984 ntBASIC16.88■□□□□ 0.29
CCDC170Q8IYT3 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms