Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDKL3Q8IVW4 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.16■□□□□ 0.18
CDKL3Q8IVW4 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDKL3Q8IVW4 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDKL3Q8IVW4 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.15■□□□□ 0.18
CDKL3Q8IVW4 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDKL3Q8IVW4 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDKL3Q8IVW4 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDKL3Q8IVW4 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CDKL3Q8IVW4 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDKL3Q8IVW4 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDKL3Q8IVW4 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDKL3Q8IVW4 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDKL3Q8IVW4 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDKL3Q8IVW4 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDKL3Q8IVW4 RPL5P21-201ENST00000404620 815 ntBASIC16.15■□□□□ 0.18
CDKL3Q8IVW4 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.15■□□□□ 0.18
CDKL3Q8IVW4 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDKL3Q8IVW4 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.15■□□□□ 0.18
CDKL3Q8IVW4 TARDBPP1-201ENST00000442013 1203 ntBASIC16.15■□□□□ 0.18
CDKL3Q8IVW4 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDKL3Q8IVW4 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.15■□□□□ 0.18
CDKL3Q8IVW4 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDKL3Q8IVW4 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
CDKL3Q8IVW4 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.15■□□□□ 0.18
CDKL3Q8IVW4 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.15■□□□□ 0.18
CDKL3Q8IVW4 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDKL3Q8IVW4 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
CDKL3Q8IVW4 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.15■□□□□ 0.18
CDKL3Q8IVW4 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.15■□□□□ 0.18
CDKL3Q8IVW4 SNHG9-202ENST00000564014 471 ntBASIC16.15■□□□□ 0.18
CDKL3Q8IVW4 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.15■□□□□ 0.18
CDKL3Q8IVW4 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.15■□□□□ 0.18
CDKL3Q8IVW4 MIR6069-201ENST00000620069 79 ntBASIC16.15■□□□□ 0.18
CDKL3Q8IVW4 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDKL3Q8IVW4 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDKL3Q8IVW4 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDKL3Q8IVW4 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.15■□□□□ 0.18
CDKL3Q8IVW4 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDKL3Q8IVW4 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDKL3Q8IVW4 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.15■□□□□ 0.18
CDKL3Q8IVW4 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDKL3Q8IVW4 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
CDKL3Q8IVW4 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDKL3Q8IVW4 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDKL3Q8IVW4 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDKL3Q8IVW4 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.15■□□□□ 0.18
CDKL3Q8IVW4 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.15■□□□□ 0.18
CDKL3Q8IVW4 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.14■□□□□ 0.18
CDKL3Q8IVW4 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.14■□□□□ 0.18
CDKL3Q8IVW4 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.14■□□□□ 0.18
CDKL3Q8IVW4 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
CDKL3Q8IVW4 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDKL3Q8IVW4 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.14■□□□□ 0.17
CDKL3Q8IVW4 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDKL3Q8IVW4 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDKL3Q8IVW4 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.14■□□□□ 0.17
CDKL3Q8IVW4 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.14■□□□□ 0.17
CDKL3Q8IVW4 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDKL3Q8IVW4 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDKL3Q8IVW4 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.14■□□□□ 0.17
CDKL3Q8IVW4 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDKL3Q8IVW4 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
CDKL3Q8IVW4 AC004967.1-201ENST00000453589 447 ntBASIC16.14■□□□□ 0.17
CDKL3Q8IVW4 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.14■□□□□ 0.17
CDKL3Q8IVW4 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.14■□□□□ 0.17
CDKL3Q8IVW4 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.14■□□□□ 0.17
CDKL3Q8IVW4 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDKL3Q8IVW4 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.14■□□□□ 0.17
CDKL3Q8IVW4 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDKL3Q8IVW4 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.14■□□□□ 0.17
CDKL3Q8IVW4 AC134684.3-201ENST00000641758 218 ntBASIC16.14■□□□□ 0.17
CDKL3Q8IVW4 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.14■□□□□ 0.17
CDKL3Q8IVW4 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.14■□□□□ 0.17
CDKL3Q8IVW4 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDKL3Q8IVW4 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDKL3Q8IVW4 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.14■□□□□ 0.17
CDKL3Q8IVW4 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDKL3Q8IVW4 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CDKL3Q8IVW4 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.14■□□□□ 0.17
CDKL3Q8IVW4 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.14■□□□□ 0.17
CDKL3Q8IVW4 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.14■□□□□ 0.17
CDKL3Q8IVW4 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.13■□□□□ 0.17
CDKL3Q8IVW4 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDKL3Q8IVW4 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDKL3Q8IVW4 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDKL3Q8IVW4 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.13■□□□□ 0.17
CDKL3Q8IVW4 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
CDKL3Q8IVW4 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CDKL3Q8IVW4 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.13■□□□□ 0.17
CDKL3Q8IVW4 AL080243.2-201ENST00000418783 582 ntBASIC16.13■□□□□ 0.17
CDKL3Q8IVW4 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.13■□□□□ 0.17
CDKL3Q8IVW4 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.13■□□□□ 0.17
CDKL3Q8IVW4 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.13■□□□□ 0.17
CDKL3Q8IVW4 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.13■□□□□ 0.17
CDKL3Q8IVW4 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.13■□□□□ 0.17
CDKL3Q8IVW4 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.13■□□□□ 0.17
CDKL3Q8IVW4 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.13■□□□□ 0.17
CDKL3Q8IVW4 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.13■□□□□ 0.17
CDKL3Q8IVW4 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms