Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CCDC141Q6ZP82 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC22.92■■□□□ 1.26
CCDC141Q6ZP82 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CCDC141Q6ZP82 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CCDC141Q6ZP82 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
CCDC141Q6ZP82 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC22.92■■□□□ 1.26
CCDC141Q6ZP82 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC22.92■■□□□ 1.26
CCDC141Q6ZP82 ACTG1P2-201ENST00000415776 1125 ntBASIC22.92■■□□□ 1.26
CCDC141Q6ZP82 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC22.92■■□□□ 1.26
CCDC141Q6ZP82 ACTG1P11-201ENST00000425411 1125 ntBASIC22.92■■□□□ 1.26
CCDC141Q6ZP82 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC22.92■■□□□ 1.26
CCDC141Q6ZP82 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC22.92■■□□□ 1.26
CCDC141Q6ZP82 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC22.92■■□□□ 1.26
CCDC141Q6ZP82 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC22.92■■□□□ 1.26
CCDC141Q6ZP82 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CCDC141Q6ZP82 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CCDC141Q6ZP82 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC22.91■■□□□ 1.26
CCDC141Q6ZP82 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
CCDC141Q6ZP82 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CCDC141Q6ZP82 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
CCDC141Q6ZP82 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
CCDC141Q6ZP82 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
CCDC141Q6ZP82 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
CCDC141Q6ZP82 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
CCDC141Q6ZP82 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC22.91■■□□□ 1.26
CCDC141Q6ZP82 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CCDC141Q6ZP82 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC22.91■■□□□ 1.26
CCDC141Q6ZP82 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC22.91■■□□□ 1.26
CCDC141Q6ZP82 FXNP2-201ENST00000411625 547 ntBASIC22.91■■□□□ 1.26
CCDC141Q6ZP82 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC22.91■■□□□ 1.26
CCDC141Q6ZP82 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC22.91■■□□□ 1.26
CCDC141Q6ZP82 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CCDC141Q6ZP82 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC22.91■■□□□ 1.26
CCDC141Q6ZP82 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC22.91■■□□□ 1.26
CCDC141Q6ZP82 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CCDC141Q6ZP82 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CCDC141Q6ZP82 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CCDC141Q6ZP82 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CCDC141Q6ZP82 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
CCDC141Q6ZP82 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC22.9■■□□□ 1.26
CCDC141Q6ZP82 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
CCDC141Q6ZP82 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CCDC141Q6ZP82 AC008132.1-202ENST00000342005 1389 ntBASIC22.9■■□□□ 1.26
CCDC141Q6ZP82 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC22.9■■□□□ 1.26
CCDC141Q6ZP82 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
CCDC141Q6ZP82 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CCDC141Q6ZP82 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
CCDC141Q6ZP82 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC22.9■■□□□ 1.26
CCDC141Q6ZP82 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC22.9■■□□□ 1.26
CCDC141Q6ZP82 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC22.9■■□□□ 1.26
CCDC141Q6ZP82 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC22.9■■□□□ 1.26
CCDC141Q6ZP82 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
CCDC141Q6ZP82 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC22.9■■□□□ 1.26
CCDC141Q6ZP82 MIR769-201ENST00000390225 118 ntBASIC22.9■■□□□ 1.26
CCDC141Q6ZP82 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CCDC141Q6ZP82 RN7SL11P-201ENST00000471305 293 ntBASIC22.9■■□□□ 1.26
CCDC141Q6ZP82 AC009955.4-201ENST00000597192 544 ntBASIC22.9■■□□□ 1.26
CCDC141Q6ZP82 AC026740.1-201ENST00000607068 791 ntBASIC22.9■■□□□ 1.26
CCDC141Q6ZP82 AL358472.3-201ENST00000608147 415 ntBASIC22.9■■□□□ 1.26
CCDC141Q6ZP82 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CCDC141Q6ZP82 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
CCDC141Q6ZP82 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
CCDC141Q6ZP82 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.26
CCDC141Q6ZP82 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
CCDC141Q6ZP82 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
CCDC141Q6ZP82 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC22.89■■□□□ 1.26
CCDC141Q6ZP82 KRT8P29-201ENST00000420409 1371 ntBASIC22.89■■□□□ 1.26
CCDC141Q6ZP82 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC22.89■■□□□ 1.26
CCDC141Q6ZP82 TNRC18P3-201ENST00000441896 2691 ntBASIC22.89■■□□□ 1.26
CCDC141Q6ZP82 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.25
CCDC141Q6ZP82 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC22.89■■□□□ 1.25
CCDC141Q6ZP82 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC22.89■■□□□ 1.25
CCDC141Q6ZP82 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC22.89■■□□□ 1.25
CCDC141Q6ZP82 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CCDC141Q6ZP82 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CCDC141Q6ZP82 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
CCDC141Q6ZP82 CRCP-204ENST00000398684 492 ntTSL 2 BASIC22.89■■□□□ 1.25
CCDC141Q6ZP82 PTPA-217ENST00000434095 870 ntTSL 2 BASIC22.89■■□□□ 1.25
CCDC141Q6ZP82 RN7SL769P-201ENST00000469386 295 ntBASIC22.89■■□□□ 1.25
CCDC141Q6ZP82 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC22.89■■□□□ 1.25
CCDC141Q6ZP82 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC22.89■■□□□ 1.25
CCDC141Q6ZP82 AC245884.6-201ENST00000515672 1067 ntBASIC22.89■■□□□ 1.25
CCDC141Q6ZP82 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC22.89■■□□□ 1.25
CCDC141Q6ZP82 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC22.89■■□□□ 1.25
CCDC141Q6ZP82 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC22.89■■□□□ 1.25
CCDC141Q6ZP82 BNIP3P13-201ENST00000599968 566 ntBASIC22.89■■□□□ 1.25
CCDC141Q6ZP82 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC22.89■■□□□ 1.25
CCDC141Q6ZP82 SUPT20HL2-201ENST00000486479 2409 ntBASIC22.89■■□□□ 1.25
CCDC141Q6ZP82 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC22.89■■□□□ 1.25
CCDC141Q6ZP82 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
CCDC141Q6ZP82 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
CCDC141Q6ZP82 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC22.88■■□□□ 1.25
CCDC141Q6ZP82 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CCDC141Q6ZP82 AC091046.1-201ENST00000331871 207 ntBASIC22.88■■□□□ 1.25
CCDC141Q6ZP82 DPM3-202ENST00000368399 517 ntBASIC22.88■■□□□ 1.25
CCDC141Q6ZP82 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
CCDC141Q6ZP82 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
CCDC141Q6ZP82 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC22.88■■□□□ 1.25
CCDC141Q6ZP82 OARD1-204ENST00000464633 717 ntTSL 2 BASIC22.88■■□□□ 1.25
CCDC141Q6ZP82 RN7SL720P-201ENST00000488178 304 ntBASIC22.88■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms