Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 AL160237.2-201ENST00000556165 472 ntBASIC11.93□□□□□ -0.5
MRPL54Q6P161 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC11.93□□□□□ -0.5
MRPL54Q6P161 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC11.93□□□□□ -0.5
MRPL54Q6P161 COX5A-202ENST00000562233 441 ntTSL 3 BASIC11.93□□□□□ -0.5
MRPL54Q6P161 COX5A-204ENST00000567270 579 ntTSL 3 BASIC11.93□□□□□ -0.5
MRPL54Q6P161 AC090616.6-201ENST00000582640 721 ntBASIC11.93□□□□□ -0.5
MRPL54Q6P161 USP36-216ENST00000589424 970 ntTSL 5 BASIC11.93□□□□□ -0.5
MRPL54Q6P161 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC11.93□□□□□ -0.5
MRPL54Q6P161 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
MRPL54Q6P161 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
MRPL54Q6P161 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
MRPL54Q6P161 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
MRPL54Q6P161 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
MRPL54Q6P161 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
MRPL54Q6P161 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
MRPL54Q6P161 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
MRPL54Q6P161 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
MRPL54Q6P161 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
MRPL54Q6P161 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
MRPL54Q6P161 APP-205ENST00000358918 2366 ntTSL 5 BASIC11.93□□□□□ -0.5
MRPL54Q6P161 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
MRPL54Q6P161 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC11.93□□□□□ -0.5
MRPL54Q6P161 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
MRPL54Q6P161 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
MRPL54Q6P161 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
MRPL54Q6P161 NCF1C-201ENST00000438382 1427 ntBASIC11.93□□□□□ -0.5
MRPL54Q6P161 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
MRPL54Q6P161 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
MRPL54Q6P161 SIGLEC16-201ENST00000599858 1437 ntBASIC11.93□□□□□ -0.5
MRPL54Q6P161 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
MRPL54Q6P161 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC11.93□□□□□ -0.5
MRPL54Q6P161 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC11.93□□□□□ -0.5
MRPL54Q6P161 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
MRPL54Q6P161 AC005562.1-201ENST00000583030 3219 ntBASIC11.92□□□□□ -0.5
MRPL54Q6P161 COL6A4P2-202ENST00000504443 2753 ntBASIC11.92□□□□□ -0.5
MRPL54Q6P161 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
MRPL54Q6P161 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
MRPL54Q6P161 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
MRPL54Q6P161 KRT18P22-201ENST00000402024 1347 ntBASIC11.92□□□□□ -0.5
MRPL54Q6P161 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC11.92□□□□□ -0.5
MRPL54Q6P161 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
MRPL54Q6P161 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
MRPL54Q6P161 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
MRPL54Q6P161 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
MRPL54Q6P161 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
MRPL54Q6P161 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
MRPL54Q6P161 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
MRPL54Q6P161 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
MRPL54Q6P161 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
MRPL54Q6P161 AL353732.1-201ENST00000569618 1459 ntBASIC11.92□□□□□ -0.5
MRPL54Q6P161 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
MRPL54Q6P161 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
MRPL54Q6P161 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
MRPL54Q6P161 MIR718-201ENST00000390190 70 ntBASIC11.92□□□□□ -0.5
MRPL54Q6P161 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC11.92□□□□□ -0.5
MRPL54Q6P161 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC11.92□□□□□ -0.5
MRPL54Q6P161 AC246785.2-201ENST00000432512 513 ntBASIC11.92□□□□□ -0.5
MRPL54Q6P161 AC087163.2-201ENST00000457299 853 ntBASIC11.92□□□□□ -0.5
MRPL54Q6P161 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
MRPL54Q6P161 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
MRPL54Q6P161 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC11.92□□□□□ -0.5
MRPL54Q6P161 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC11.92□□□□□ -0.5
MRPL54Q6P161 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC11.92□□□□□ -0.5
MRPL54Q6P161 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC11.92□□□□□ -0.5
MRPL54Q6P161 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
MRPL54Q6P161 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC11.92□□□□□ -0.5
MRPL54Q6P161 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC11.92□□□□□ -0.5
MRPL54Q6P161 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
MRPL54Q6P161 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
MRPL54Q6P161 SLC9A3P2-201ENST00000447821 2021 ntBASIC11.92□□□□□ -0.5
MRPL54Q6P161 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
MRPL54Q6P161 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
MRPL54Q6P161 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
MRPL54Q6P161 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
MRPL54Q6P161 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
MRPL54Q6P161 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
MRPL54Q6P161 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
MRPL54Q6P161 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
MRPL54Q6P161 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
MRPL54Q6P161 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
MRPL54Q6P161 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
MRPL54Q6P161 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
MRPL54Q6P161 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
MRPL54Q6P161 USP3-204ENST00000540797 5474 ntTSL 2 BASIC11.92□□□□□ -0.5
MRPL54Q6P161 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
MRPL54Q6P161 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
MRPL54Q6P161 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
MRPL54Q6P161 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
MRPL54Q6P161 HSPA7-201ENST00000445535 1927 ntBASIC11.92□□□□□ -0.5
MRPL54Q6P161 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
MRPL54Q6P161 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
MRPL54Q6P161 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
MRPL54Q6P161 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
MRPL54Q6P161 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
MRPL54Q6P161 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
MRPL54Q6P161 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
MRPL54Q6P161 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
MRPL54Q6P161 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC11.91□□□□□ -0.5
MRPL54Q6P161 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
MRPL54Q6P161 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms