Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AC012441.1-201ENST00000446669 685 ntBASIC16.58■□□□□ 0.24
VARS2Q5ST30 KLF2P4-201ENST00000451959 1225 ntBASIC16.58■□□□□ 0.24
VARS2Q5ST30 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC16.58■□□□□ 0.24
VARS2Q5ST30 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
VARS2Q5ST30 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VARS2Q5ST30 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC16.58■□□□□ 0.24
VARS2Q5ST30 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.58■□□□□ 0.24
VARS2Q5ST30 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.58■□□□□ 0.24
VARS2Q5ST30 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.58■□□□□ 0.24
VARS2Q5ST30 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC16.58■□□□□ 0.24
VARS2Q5ST30 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC16.58■□□□□ 0.24
VARS2Q5ST30 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
VARS2Q5ST30 AGER-206ENST00000375070 1463 ntTSL 5 BASIC16.58■□□□□ 0.24
VARS2Q5ST30 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
VARS2Q5ST30 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
VARS2Q5ST30 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
VARS2Q5ST30 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
VARS2Q5ST30 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC16.58■□□□□ 0.24
VARS2Q5ST30 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
VARS2Q5ST30 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VARS2Q5ST30 AL603832.2-201ENST00000566195 2125 ntBASIC16.58■□□□□ 0.24
VARS2Q5ST30 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VARS2Q5ST30 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VARS2Q5ST30 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.58■□□□□ 0.24
VARS2Q5ST30 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VARS2Q5ST30 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
VARS2Q5ST30 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VARS2Q5ST30 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.57■□□□□ 0.24
VARS2Q5ST30 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
VARS2Q5ST30 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VARS2Q5ST30 AC008894.3-201ENST00000624324 3103 ntBASIC16.57■□□□□ 0.24
VARS2Q5ST30 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
VARS2Q5ST30 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.57■□□□□ 0.24
VARS2Q5ST30 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.57■□□□□ 0.24
VARS2Q5ST30 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.57■□□□□ 0.24
VARS2Q5ST30 AC024909.3-201ENST00000611513 2257 ntBASIC16.57■□□□□ 0.24
VARS2Q5ST30 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
VARS2Q5ST30 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.57■□□□□ 0.24
VARS2Q5ST30 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VARS2Q5ST30 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VARS2Q5ST30 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
VARS2Q5ST30 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC16.57■□□□□ 0.24
VARS2Q5ST30 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.57■□□□□ 0.24
VARS2Q5ST30 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.57■□□□□ 0.24
VARS2Q5ST30 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VARS2Q5ST30 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VARS2Q5ST30 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
VARS2Q5ST30 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
VARS2Q5ST30 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
VARS2Q5ST30 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.57■□□□□ 0.24
VARS2Q5ST30 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
VARS2Q5ST30 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
VARS2Q5ST30 AC092933.1-201ENST00000393644 945 ntBASIC16.57■□□□□ 0.24
VARS2Q5ST30 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.57■□□□□ 0.24
VARS2Q5ST30 AC010422.1-201ENST00000414548 543 ntTSL 2 BASIC16.57■□□□□ 0.24
VARS2Q5ST30 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.57■□□□□ 0.24
VARS2Q5ST30 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC16.57■□□□□ 0.24
VARS2Q5ST30 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC16.57■□□□□ 0.24
VARS2Q5ST30 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC16.57■□□□□ 0.24
VARS2Q5ST30 GAPDHP40-201ENST00000505218 1006 ntBASIC16.57■□□□□ 0.24
VARS2Q5ST30 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
VARS2Q5ST30 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC16.57■□□□□ 0.24
VARS2Q5ST30 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC16.57■□□□□ 0.24
VARS2Q5ST30 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
VARS2Q5ST30 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VARS2Q5ST30 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
VARS2Q5ST30 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
VARS2Q5ST30 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
VARS2Q5ST30 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VARS2Q5ST30 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VARS2Q5ST30 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
VARS2Q5ST30 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
VARS2Q5ST30 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.57■□□□□ 0.24
VARS2Q5ST30 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
VARS2Q5ST30 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.57■□□□□ 0.24
VARS2Q5ST30 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VARS2Q5ST30 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VARS2Q5ST30 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
VARS2Q5ST30 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
VARS2Q5ST30 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
VARS2Q5ST30 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.56■□□□□ 0.24
VARS2Q5ST30 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
VARS2Q5ST30 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
VARS2Q5ST30 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.56■□□□□ 0.24
VARS2Q5ST30 AP003680.1-201ENST00000598970 3660 ntBASIC16.56■□□□□ 0.24
VARS2Q5ST30 CROCCP1-201ENST00000426910 5675 ntBASIC16.56■□□□□ 0.24
VARS2Q5ST30 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.56■□□□□ 0.24
VARS2Q5ST30 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
VARS2Q5ST30 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.56■□□□□ 0.24
VARS2Q5ST30 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.56■□□□□ 0.24
VARS2Q5ST30 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
VARS2Q5ST30 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.56■□□□□ 0.24
VARS2Q5ST30 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
VARS2Q5ST30 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VARS2Q5ST30 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
VARS2Q5ST30 AC093525.8-201ENST00000624099 1342 ntBASIC16.56■□□□□ 0.24
VARS2Q5ST30 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.56■□□□□ 0.24
VARS2Q5ST30 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
VARS2Q5ST30 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VARS2Q5ST30 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms