Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RNFT1Q5M7Z0 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
RNFT1Q5M7Z0 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.08□□□□□ -0.16
RNFT1Q5M7Z0 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.08□□□□□ -0.16
RNFT1Q5M7Z0 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RNFT1Q5M7Z0 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.07□□□□□ -0.16
RNFT1Q5M7Z0 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
RNFT1Q5M7Z0 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.07□□□□□ -0.16
RNFT1Q5M7Z0 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
RNFT1Q5M7Z0 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
RNFT1Q5M7Z0 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RNFT1Q5M7Z0 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
RNFT1Q5M7Z0 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
RNFT1Q5M7Z0 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RNFT1Q5M7Z0 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RNFT1Q5M7Z0 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RNFT1Q5M7Z0 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RNFT1Q5M7Z0 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC14.07□□□□□ -0.16
RNFT1Q5M7Z0 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RNFT1Q5M7Z0 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RNFT1Q5M7Z0 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RNFT1Q5M7Z0 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RNFT1Q5M7Z0 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
RNFT1Q5M7Z0 AC016694.1-201ENST00000434179 700 ntBASIC14.07□□□□□ -0.16
RNFT1Q5M7Z0 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC14.07□□□□□ -0.16
RNFT1Q5M7Z0 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.07□□□□□ -0.16
RNFT1Q5M7Z0 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC14.07□□□□□ -0.16
RNFT1Q5M7Z0 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC14.07□□□□□ -0.16
RNFT1Q5M7Z0 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC14.07□□□□□ -0.16
RNFT1Q5M7Z0 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC14.07□□□□□ -0.16
RNFT1Q5M7Z0 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RNFT1Q5M7Z0 TECR-220ENST00000600083 1204 ntTSL 2 BASIC14.07□□□□□ -0.16
RNFT1Q5M7Z0 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
RNFT1Q5M7Z0 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RNFT1Q5M7Z0 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.07□□□□□ -0.16
RNFT1Q5M7Z0 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RNFT1Q5M7Z0 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
RNFT1Q5M7Z0 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RNFT1Q5M7Z0 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RNFT1Q5M7Z0 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
RNFT1Q5M7Z0 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
RNFT1Q5M7Z0 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.07□□□□□ -0.16
RNFT1Q5M7Z0 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.07□□□□□ -0.16
RNFT1Q5M7Z0 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.07□□□□□ -0.16
RNFT1Q5M7Z0 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC14.07□□□□□ -0.16
RNFT1Q5M7Z0 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
RNFT1Q5M7Z0 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RNFT1Q5M7Z0 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.06□□□□□ -0.16
RNFT1Q5M7Z0 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
RNFT1Q5M7Z0 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.06□□□□□ -0.16
RNFT1Q5M7Z0 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
RNFT1Q5M7Z0 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC14.06□□□□□ -0.16
RNFT1Q5M7Z0 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RNFT1Q5M7Z0 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
RNFT1Q5M7Z0 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RNFT1Q5M7Z0 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RNFT1Q5M7Z0 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.06□□□□□ -0.16
RNFT1Q5M7Z0 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RNFT1Q5M7Z0 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RNFT1Q5M7Z0 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RNFT1Q5M7Z0 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RNFT1Q5M7Z0 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RNFT1Q5M7Z0 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RNFT1Q5M7Z0 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.06□□□□□ -0.16
RNFT1Q5M7Z0 MIR1908-201ENST00000410394 80 ntBASIC14.06□□□□□ -0.16
RNFT1Q5M7Z0 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC14.06□□□□□ -0.16
RNFT1Q5M7Z0 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
RNFT1Q5M7Z0 FO681548.1-201ENST00000455617 1132 ntBASIC14.06□□□□□ -0.16
RNFT1Q5M7Z0 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RNFT1Q5M7Z0 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RNFT1Q5M7Z0 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RNFT1Q5M7Z0 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC14.06□□□□□ -0.16
RNFT1Q5M7Z0 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.06□□□□□ -0.16
RNFT1Q5M7Z0 USB1-203ENST00000539737 1212 ntTSL 2 BASIC14.06□□□□□ -0.16
RNFT1Q5M7Z0 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC14.06□□□□□ -0.16
RNFT1Q5M7Z0 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RNFT1Q5M7Z0 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.06□□□□□ -0.16
RNFT1Q5M7Z0 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.06□□□□□ -0.16
RNFT1Q5M7Z0 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC14.06□□□□□ -0.16
RNFT1Q5M7Z0 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
RNFT1Q5M7Z0 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.06□□□□□ -0.16
RNFT1Q5M7Z0 LTF-203ENST00000426532 2494 ntTSL 2 BASIC14.06□□□□□ -0.16
RNFT1Q5M7Z0 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.06□□□□□ -0.16
RNFT1Q5M7Z0 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RNFT1Q5M7Z0 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.06□□□□□ -0.16
RNFT1Q5M7Z0 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.06□□□□□ -0.16
RNFT1Q5M7Z0 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
RNFT1Q5M7Z0 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
RNFT1Q5M7Z0 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RNFT1Q5M7Z0 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.06□□□□□ -0.16
RNFT1Q5M7Z0 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RNFT1Q5M7Z0 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RNFT1Q5M7Z0 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RNFT1Q5M7Z0 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.06□□□□□ -0.16
RNFT1Q5M7Z0 AC024909.3-201ENST00000611513 2257 ntBASIC14.06□□□□□ -0.16
RNFT1Q5M7Z0 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
RNFT1Q5M7Z0 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
RNFT1Q5M7Z0 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
RNFT1Q5M7Z0 AC010491.1-201ENST00000563101 2797 ntBASIC14.05□□□□□ -0.16
RNFT1Q5M7Z0 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 405.5 ms