Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SNRPFP62306 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
SNRPFP62306 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SNRPFP62306 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
SNRPFP62306 CLK3P2-201ENST00000427566 1453 ntBASIC16.99■□□□□ 0.31
SNRPFP62306 AC073347.1-201ENST00000421633 2643 ntBASIC16.99■□□□□ 0.31
SNRPFP62306 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
SNRPFP62306 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SNRPFP62306 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SNRPFP62306 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SNRPFP62306 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.98■□□□□ 0.31
SNRPFP62306 AC023157.3-201ENST00000619086 2088 ntBASIC16.98■□□□□ 0.31
SNRPFP62306 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SNRPFP62306 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SNRPFP62306 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SNRPFP62306 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SNRPFP62306 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SNRPFP62306 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SNRPFP62306 AC148477.4-201ENST00000613430 1793 ntBASIC16.98■□□□□ 0.31
SNRPFP62306 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SNRPFP62306 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SNRPFP62306 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SNRPFP62306 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.98■□□□□ 0.31
SNRPFP62306 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SNRPFP62306 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SNRPFP62306 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SNRPFP62306 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.98■□□□□ 0.31
SNRPFP62306 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.98■□□□□ 0.31
SNRPFP62306 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.98■□□□□ 0.31
SNRPFP62306 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.98■□□□□ 0.31
SNRPFP62306 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
SNRPFP62306 FAM86LP-201ENST00000478302 853 ntBASIC16.98■□□□□ 0.31
SNRPFP62306 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.98■□□□□ 0.31
SNRPFP62306 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.98■□□□□ 0.31
SNRPFP62306 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SNRPFP62306 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC16.98■□□□□ 0.31
SNRPFP62306 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SNRPFP62306 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.98■□□□□ 0.31
SNRPFP62306 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.98■□□□□ 0.31
SNRPFP62306 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SNRPFP62306 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SNRPFP62306 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
SNRPFP62306 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SNRPFP62306 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.98■□□□□ 0.31
SNRPFP62306 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.98■□□□□ 0.31
SNRPFP62306 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SNRPFP62306 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SNRPFP62306 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
SNRPFP62306 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
SNRPFP62306 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.98■□□□□ 0.31
SNRPFP62306 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.97■□□□□ 0.31
SNRPFP62306 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.97■□□□□ 0.31
SNRPFP62306 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
SNRPFP62306 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SNRPFP62306 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
SNRPFP62306 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.97■□□□□ 0.31
SNRPFP62306 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SNRPFP62306 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SNRPFP62306 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC16.97■□□□□ 0.31
SNRPFP62306 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.97■□□□□ 0.31
SNRPFP62306 SERBP1P5-201ENST00000510079 1181 ntBASIC16.97■□□□□ 0.31
SNRPFP62306 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.97■□□□□ 0.31
SNRPFP62306 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.97■□□□□ 0.31
SNRPFP62306 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.97■□□□□ 0.31
SNRPFP62306 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.97■□□□□ 0.31
SNRPFP62306 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.97■□□□□ 0.31
SNRPFP62306 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
SNRPFP62306 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.97■□□□□ 0.31
SNRPFP62306 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.97■□□□□ 0.31
SNRPFP62306 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SNRPFP62306 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SNRPFP62306 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SNRPFP62306 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SNRPFP62306 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SNRPFP62306 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SNRPFP62306 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.97■□□□□ 0.31
SNRPFP62306 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.97■□□□□ 0.31
SNRPFP62306 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SNRPFP62306 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
SNRPFP62306 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SNRPFP62306 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SNRPFP62306 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
SNRPFP62306 MROH4P-201ENST00000431302 1578 ntBASIC16.97■□□□□ 0.31
SNRPFP62306 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.97■□□□□ 0.31
SNRPFP62306 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
SNRPFP62306 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SNRPFP62306 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SNRPFP62306 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SNRPFP62306 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SNRPFP62306 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.96■□□□□ 0.31
SNRPFP62306 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SNRPFP62306 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
SNRPFP62306 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SNRPFP62306 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SNRPFP62306 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
SNRPFP62306 AC138035.3-201ENST00000622706 2791 ntBASIC16.96■□□□□ 0.31
SNRPFP62306 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.96■□□□□ 0.31
SNRPFP62306 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
SNRPFP62306 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SNRPFP62306 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms