Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AP000347.1-202ENST00000435868 847 ntBASIC13.86□□□□□ -0.19
CX3CR1P49238 EEF1DP4-201ENST00000446006 880 ntBASIC13.86□□□□□ -0.19
CX3CR1P49238 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.86□□□□□ -0.19
CX3CR1P49238 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC13.86□□□□□ -0.19
CX3CR1P49238 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC13.86□□□□□ -0.19
CX3CR1P49238 ALG1L8P-201ENST00000533887 760 ntBASIC13.86□□□□□ -0.19
CX3CR1P49238 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC13.86□□□□□ -0.19
CX3CR1P49238 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC13.86□□□□□ -0.19
CX3CR1P49238 MIR3687-2-201ENST00000577708 61 ntBASIC13.86□□□□□ -0.19
CX3CR1P49238 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC13.86□□□□□ -0.19
CX3CR1P49238 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC13.86□□□□□ -0.19
CX3CR1P49238 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CX3CR1P49238 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC13.86□□□□□ -0.19
CX3CR1P49238 MIR3687-1-201ENST00000614492 61 ntBASIC13.86□□□□□ -0.19
CX3CR1P49238 AL513210.1-201ENST00000629608 234 ntBASIC13.86□□□□□ -0.19
CX3CR1P49238 AC009090.5-201ENST00000624886 2285 ntBASIC13.86□□□□□ -0.19
CX3CR1P49238 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC13.86□□□□□ -0.19
CX3CR1P49238 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.86□□□□□ -0.19
CX3CR1P49238 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CX3CR1P49238 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.86□□□□□ -0.19
CX3CR1P49238 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CX3CR1P49238 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CX3CR1P49238 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.86□□□□□ -0.19
CX3CR1P49238 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CX3CR1P49238 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CX3CR1P49238 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CX3CR1P49238 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CX3CR1P49238 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
CX3CR1P49238 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CX3CR1P49238 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CX3CR1P49238 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
CX3CR1P49238 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
CX3CR1P49238 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CX3CR1P49238 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CX3CR1P49238 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CX3CR1P49238 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CX3CR1P49238 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CX3CR1P49238 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CX3CR1P49238 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CX3CR1P49238 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CX3CR1P49238 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC13.85□□□□□ -0.19
CX3CR1P49238 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.85□□□□□ -0.19
CX3CR1P49238 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CX3CR1P49238 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CX3CR1P49238 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CX3CR1P49238 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CX3CR1P49238 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CX3CR1P49238 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CX3CR1P49238 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CX3CR1P49238 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CX3CR1P49238 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CX3CR1P49238 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CX3CR1P49238 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CX3CR1P49238 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.85□□□□□ -0.19
CX3CR1P49238 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CX3CR1P49238 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CX3CR1P49238 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC13.85□□□□□ -0.19
CX3CR1P49238 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CX3CR1P49238 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC13.85□□□□□ -0.19
CX3CR1P49238 STOM-202ENST00000347359 870 ntTSL 2 BASIC13.85□□□□□ -0.19
CX3CR1P49238 AC004461.1-201ENST00000412461 403 ntBASIC13.85□□□□□ -0.19
CX3CR1P49238 AL627223.1-201ENST00000416693 442 ntBASIC13.85□□□□□ -0.19
CX3CR1P49238 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC13.85□□□□□ -0.19
CX3CR1P49238 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC13.85□□□□□ -0.19
CX3CR1P49238 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CX3CR1P49238 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13.85□□□□□ -0.19
CX3CR1P49238 YBX1P5-201ENST00000509441 847 ntBASIC13.85□□□□□ -0.19
CX3CR1P49238 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC13.85□□□□□ -0.19
CX3CR1P49238 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CX3CR1P49238 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC13.85□□□□□ -0.19
CX3CR1P49238 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC13.85□□□□□ -0.19
CX3CR1P49238 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC13.85□□□□□ -0.19
CX3CR1P49238 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC13.85□□□□□ -0.19
CX3CR1P49238 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CX3CR1P49238 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CX3CR1P49238 AC010327.4-202ENST00000591484 748 ntBASIC13.85□□□□□ -0.19
CX3CR1P49238 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC13.85□□□□□ -0.19
CX3CR1P49238 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC13.85□□□□□ -0.19
CX3CR1P49238 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CX3CR1P49238 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CX3CR1P49238 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CX3CR1P49238 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.85□□□□□ -0.19
CX3CR1P49238 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.85□□□□□ -0.19
CX3CR1P49238 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CX3CR1P49238 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CX3CR1P49238 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.85□□□□□ -0.19
CX3CR1P49238 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CX3CR1P49238 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CX3CR1P49238 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CX3CR1P49238 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.85□□□□□ -0.19
CX3CR1P49238 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.85□□□□□ -0.19
CX3CR1P49238 AC006486.2-201ENST00000624246 2199 ntBASIC13.85□□□□□ -0.19
CX3CR1P49238 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CX3CR1P49238 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CX3CR1P49238 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.85□□□□□ -0.19
CX3CR1P49238 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CX3CR1P49238 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
CX3CR1P49238 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CX3CR1P49238 AL009178.2-201ENST00000597278 2719 ntBASIC13.84□□□□□ -0.19
CX3CR1P49238 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms