Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RFC4P35249 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RFC4P35249 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RFC4P35249 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RFC4P35249 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
RFC4P35249 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RFC4P35249 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
RFC4P35249 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
RFC4P35249 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC19.49■□□□□ 0.71
RFC4P35249 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RFC4P35249 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RFC4P35249 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RFC4P35249 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RFC4P35249 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RFC4P35249 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RFC4P35249 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC19.49■□□□□ 0.71
RFC4P35249 B9D1-203ENST00000395615 805 ntTSL 3 BASIC19.49■□□□□ 0.71
RFC4P35249 LDHBP1-201ENST00000455730 1119 ntBASIC19.49■□□□□ 0.71
RFC4P35249 RN7SL11P-201ENST00000471305 293 ntBASIC19.49■□□□□ 0.71
RFC4P35249 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
RFC4P35249 NCK2-206ENST00000522586 490 ntTSL 5 BASIC19.49■□□□□ 0.71
RFC4P35249 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RFC4P35249 RN7SL713P-201ENST00000582127 302 ntBASIC19.49■□□□□ 0.71
RFC4P35249 MIR5572-201ENST00000583188 137 ntBASIC19.49■□□□□ 0.71
RFC4P35249 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC19.49■□□□□ 0.71
RFC4P35249 AC091544.8-201ENST00000619490 361 ntBASIC19.49■□□□□ 0.71
RFC4P35249 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC19.49■□□□□ 0.71
RFC4P35249 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC19.49■□□□□ 0.71
RFC4P35249 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RFC4P35249 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
RFC4P35249 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RFC4P35249 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC19.49■□□□□ 0.71
RFC4P35249 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC19.49■□□□□ 0.71
RFC4P35249 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RFC4P35249 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RFC4P35249 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC19.49■□□□□ 0.71
RFC4P35249 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RFC4P35249 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
RFC4P35249 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RFC4P35249 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RFC4P35249 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RFC4P35249 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RFC4P35249 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RFC4P35249 MIR33B-201ENST00000385104 96 ntBASIC19.48■□□□□ 0.71
RFC4P35249 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
RFC4P35249 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC19.48■□□□□ 0.71
RFC4P35249 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
RFC4P35249 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC19.48■□□□□ 0.71
RFC4P35249 AC005730.2-201ENST00000564549 1184 ntBASIC19.48■□□□□ 0.71
RFC4P35249 RN7SL774P-201ENST00000577467 290 ntBASIC19.48■□□□□ 0.71
RFC4P35249 OR10B1P-201ENST00000601666 907 ntBASIC19.48■□□□□ 0.71
RFC4P35249 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC19.48■□□□□ 0.71
RFC4P35249 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
RFC4P35249 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RFC4P35249 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RFC4P35249 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC19.48■□□□□ 0.71
RFC4P35249 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RFC4P35249 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
RFC4P35249 KRT8P4-201ENST00000509735 1454 ntBASIC19.48■□□□□ 0.71
RFC4P35249 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFC4P35249 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFC4P35249 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFC4P35249 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.47■□□□□ 0.71
RFC4P35249 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFC4P35249 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RFC4P35249 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFC4P35249 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFC4P35249 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RFC4P35249 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFC4P35249 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFC4P35249 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RFC4P35249 FTLP10-202ENST00000505798 471 ntBASIC19.47■□□□□ 0.71
RFC4P35249 AC134698.3-201ENST00000523880 214 ntBASIC19.47■□□□□ 0.71
RFC4P35249 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC19.47■□□□□ 0.71
RFC4P35249 FGFR3P5-201ENST00000564496 886 ntBASIC19.47■□□□□ 0.71
RFC4P35249 INO80C-210ENST00000590757 595 ntTSL 2 BASIC19.47■□□□□ 0.71
RFC4P35249 AC073413.1-201ENST00000603927 732 ntBASIC19.47■□□□□ 0.71
RFC4P35249 ZACNP1-201ENST00000612259 710 ntBASIC19.47■□□□□ 0.71
RFC4P35249 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFC4P35249 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
RFC4P35249 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFC4P35249 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFC4P35249 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFC4P35249 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
RFC4P35249 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RFC4P35249 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFC4P35249 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFC4P35249 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RFC4P35249 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
RFC4P35249 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
RFC4P35249 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC19.46■□□□□ 0.71
RFC4P35249 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
RFC4P35249 AC018695.7-201ENST00000624587 2492 ntBASIC19.46■□□□□ 0.71
RFC4P35249 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFC4P35249 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC19.46■□□□□ 0.71
RFC4P35249 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFC4P35249 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFC4P35249 CRCP-204ENST00000398684 492 ntTSL 2 BASIC19.46■□□□□ 0.71
RFC4P35249 AC104457.1-201ENST00000401024 814 ntBASIC19.46■□□□□ 0.71
RFC4P35249 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms