Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 MIR4453-201ENST00000584019 89 ntBASIC16.6■□□□□ 0.25
CHRNA3P32297 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CHRNA3P32297 AC018529.1-201ENST00000613063 361 ntBASIC16.6■□□□□ 0.25
CHRNA3P32297 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHRNA3P32297 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
CHRNA3P32297 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
CHRNA3P32297 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHRNA3P32297 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHRNA3P32297 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.6■□□□□ 0.25
CHRNA3P32297 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
CHRNA3P32297 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHRNA3P32297 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
CHRNA3P32297 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHRNA3P32297 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHRNA3P32297 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.6■□□□□ 0.25
CHRNA3P32297 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHRNA3P32297 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.6■□□□□ 0.25
CHRNA3P32297 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHRNA3P32297 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
CHRNA3P32297 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHRNA3P32297 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHRNA3P32297 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
CHRNA3P32297 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.59■□□□□ 0.25
CHRNA3P32297 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHRNA3P32297 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHRNA3P32297 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHRNA3P32297 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CHRNA3P32297 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
CHRNA3P32297 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHRNA3P32297 AC091951.1-201ENST00000512854 2465 ntBASIC16.59■□□□□ 0.25
CHRNA3P32297 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CHRNA3P32297 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHRNA3P32297 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHRNA3P32297 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CHRNA3P32297 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CHRNA3P32297 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHRNA3P32297 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CHRNA3P32297 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHRNA3P32297 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CHRNA3P32297 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CHRNA3P32297 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CHRNA3P32297 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHRNA3P32297 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CHRNA3P32297 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.59■□□□□ 0.25
CHRNA3P32297 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.59■□□□□ 0.25
CHRNA3P32297 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.59■□□□□ 0.25
CHRNA3P32297 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.59■□□□□ 0.25
CHRNA3P32297 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.59■□□□□ 0.25
CHRNA3P32297 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CHRNA3P32297 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.59■□□□□ 0.25
CHRNA3P32297 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.59■□□□□ 0.25
CHRNA3P32297 AC005498.2-205ENST00000593218 784 ntBASIC16.59■□□□□ 0.25
CHRNA3P32297 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHRNA3P32297 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHRNA3P32297 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CHRNA3P32297 KRT8P44-201ENST00000441609 1350 ntBASIC16.59■□□□□ 0.25
CHRNA3P32297 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.59■□□□□ 0.25
CHRNA3P32297 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHRNA3P32297 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.59■□□□□ 0.25
CHRNA3P32297 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
CHRNA3P32297 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CHRNA3P32297 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.59■□□□□ 0.25
CHRNA3P32297 AC126365.1-201ENST00000578585 1514 ntBASIC16.59■□□□□ 0.25
CHRNA3P32297 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CHRNA3P32297 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.59■□□□□ 0.25
CHRNA3P32297 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.59■□□□□ 0.25
CHRNA3P32297 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHRNA3P32297 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHRNA3P32297 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHRNA3P32297 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.59■□□□□ 0.25
CHRNA3P32297 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHRNA3P32297 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHRNA3P32297 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHRNA3P32297 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.59■□□□□ 0.25
CHRNA3P32297 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.58■□□□□ 0.25
CHRNA3P32297 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
CHRNA3P32297 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CHRNA3P32297 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
CHRNA3P32297 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CHRNA3P32297 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
CHRNA3P32297 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.58■□□□□ 0.25
CHRNA3P32297 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
CHRNA3P32297 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CHRNA3P32297 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHRNA3P32297 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHRNA3P32297 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CHRNA3P32297 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CHRNA3P32297 FAM220BP-201ENST00000377689 816 ntBASIC16.58■□□□□ 0.24
CHRNA3P32297 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
CHRNA3P32297 MIR943-201ENST00000401286 94 ntBASIC16.58■□□□□ 0.24
CHRNA3P32297 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.58■□□□□ 0.24
CHRNA3P32297 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.58■□□□□ 0.24
CHRNA3P32297 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.58■□□□□ 0.24
CHRNA3P32297 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.58■□□□□ 0.24
CHRNA3P32297 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.58■□□□□ 0.24
CHRNA3P32297 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.58■□□□□ 0.24
CHRNA3P32297 AC140878.1-201ENST00000565277 250 ntBASIC16.58■□□□□ 0.24
CHRNA3P32297 AC003101.2-201ENST00000612557 442 ntBASIC16.58■□□□□ 0.24
CHRNA3P32297 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHRNA3P32297 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms