Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VAMP1P23763 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.35□□□□□ -0.27
VAMP1P23763 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
VAMP1P23763 KRT8P44-201ENST00000441609 1350 ntBASIC13.35□□□□□ -0.27
VAMP1P23763 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC13.35□□□□□ -0.27
VAMP1P23763 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.35□□□□□ -0.27
VAMP1P23763 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.35□□□□□ -0.27
VAMP1P23763 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VAMP1P23763 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
VAMP1P23763 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VAMP1P23763 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.35□□□□□ -0.27
VAMP1P23763 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
VAMP1P23763 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
VAMP1P23763 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VAMP1P23763 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.35□□□□□ -0.27
VAMP1P23763 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VAMP1P23763 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VAMP1P23763 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VAMP1P23763 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VAMP1P23763 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC13.35□□□□□ -0.27
VAMP1P23763 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
VAMP1P23763 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC13.35□□□□□ -0.27
VAMP1P23763 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VAMP1P23763 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC13.35□□□□□ -0.27
VAMP1P23763 AC245100.5-201ENST00000452108 331 ntBASIC13.35□□□□□ -0.27
VAMP1P23763 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC13.35□□□□□ -0.27
VAMP1P23763 EHF-205ENST00000527935 557 ntTSL 2 BASIC13.35□□□□□ -0.27
VAMP1P23763 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC13.35□□□□□ -0.27
VAMP1P23763 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC13.35□□□□□ -0.27
VAMP1P23763 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC13.35□□□□□ -0.27
VAMP1P23763 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC13.35□□□□□ -0.27
VAMP1P23763 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC13.35□□□□□ -0.27
VAMP1P23763 NKAPP1-205ENST00000585790 367 ntBASIC13.35□□□□□ -0.27
VAMP1P23763 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
VAMP1P23763 AP001269.4-201ENST00000609611 512 ntBASIC13.35□□□□□ -0.27
VAMP1P23763 AL139288.1-201ENST00000623748 933 ntBASIC13.35□□□□□ -0.27
VAMP1P23763 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC13.35□□□□□ -0.27
VAMP1P23763 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
VAMP1P23763 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
VAMP1P23763 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VAMP1P23763 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
VAMP1P23763 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VAMP1P23763 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.35□□□□□ -0.27
VAMP1P23763 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
VAMP1P23763 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VAMP1P23763 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC13.35□□□□□ -0.27
VAMP1P23763 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VAMP1P23763 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.35□□□□□ -0.27
VAMP1P23763 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.35□□□□□ -0.27
VAMP1P23763 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
VAMP1P23763 MED25-212ENST00000618715 1467 ntTSL 5 BASIC13.35□□□□□ -0.27
VAMP1P23763 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VAMP1P23763 AC148477.4-201ENST00000613430 1793 ntBASIC13.35□□□□□ -0.27
VAMP1P23763 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
VAMP1P23763 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
VAMP1P23763 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VAMP1P23763 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
VAMP1P23763 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VAMP1P23763 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
VAMP1P23763 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
VAMP1P23763 AC079781.5-202ENST00000641784 3743 ntBASIC13.35□□□□□ -0.27
VAMP1P23763 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
VAMP1P23763 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.34□□□□□ -0.27
VAMP1P23763 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.34□□□□□ -0.27
VAMP1P23763 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
VAMP1P23763 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.34□□□□□ -0.27
VAMP1P23763 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.34□□□□□ -0.27
VAMP1P23763 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VAMP1P23763 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
VAMP1P23763 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC13.34□□□□□ -0.27
VAMP1P23763 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
VAMP1P23763 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VAMP1P23763 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VAMP1P23763 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
VAMP1P23763 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
VAMP1P23763 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VAMP1P23763 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
VAMP1P23763 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VAMP1P23763 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
VAMP1P23763 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
VAMP1P23763 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
VAMP1P23763 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
VAMP1P23763 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
VAMP1P23763 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
VAMP1P23763 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
VAMP1P23763 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
VAMP1P23763 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VAMP1P23763 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
VAMP1P23763 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
VAMP1P23763 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC13.34□□□□□ -0.27
VAMP1P23763 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
VAMP1P23763 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC13.34□□□□□ -0.27
VAMP1P23763 FXN-203ENST00000396366 922 ntTSL 2 BASIC13.34□□□□□ -0.27
VAMP1P23763 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
VAMP1P23763 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
VAMP1P23763 AL596275.1-201ENST00000423464 877 ntBASIC13.34□□□□□ -0.27
VAMP1P23763 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
VAMP1P23763 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC13.34□□□□□ -0.27
VAMP1P23763 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC13.34□□□□□ -0.27
VAMP1P23763 AP002414.4-201ENST00000589764 1148 ntBASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms