Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 BCAR1-209ENST00000546196 1340 ntBASIC15.17■□□□□ 0.02
CAPN3P20807 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CAPN3P20807 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CAPN3P20807 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CAPN3P20807 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CAPN3P20807 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.17■□□□□ 0.02
CAPN3P20807 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CAPN3P20807 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CAPN3P20807 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.17■□□□□ 0.02
CAPN3P20807 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CAPN3P20807 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CAPN3P20807 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CAPN3P20807 AC007686.3-201ENST00000619017 3487 ntBASIC15.17■□□□□ 0.02
CAPN3P20807 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CAPN3P20807 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.17■□□□□ 0.02
CAPN3P20807 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.17■□□□□ 0.02
CAPN3P20807 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.17■□□□□ 0.02
CAPN3P20807 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.17■□□□□ 0.02
CAPN3P20807 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.17■□□□□ 0.02
CAPN3P20807 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CAPN3P20807 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
CAPN3P20807 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CAPN3P20807 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
CAPN3P20807 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.17■□□□□ 0.02
CAPN3P20807 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CAPN3P20807 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CAPN3P20807 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.17■□□□□ 0.02
CAPN3P20807 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.17■□□□□ 0.02
CAPN3P20807 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.17■□□□□ 0.02
CAPN3P20807 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CAPN3P20807 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CAPN3P20807 PDPK2P-202ENST00000562415 1191 ntBASIC15.17■□□□□ 0.02
CAPN3P20807 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.17■□□□□ 0.02
CAPN3P20807 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC15.17■□□□□ 0.02
CAPN3P20807 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
CAPN3P20807 AC073389.1-201ENST00000595595 795 ntBASIC15.17■□□□□ 0.02
CAPN3P20807 AC004877.2-201ENST00000623941 599 ntBASIC15.17■□□□□ 0.02
CAPN3P20807 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
CAPN3P20807 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CAPN3P20807 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.17■□□□□ 0.02
CAPN3P20807 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.17■□□□□ 0.02
CAPN3P20807 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.17■□□□□ 0.02
CAPN3P20807 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.17■□□□□ 0.02
CAPN3P20807 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CAPN3P20807 AC007191.1-201ENST00000623179 2995 ntBASIC15.17■□□□□ 0.02
CAPN3P20807 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CAPN3P20807 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.17■□□□□ 0.02
CAPN3P20807 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.17■□□□□ 0.02
CAPN3P20807 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.17■□□□□ 0.02
CAPN3P20807 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CAPN3P20807 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CAPN3P20807 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CAPN3P20807 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CAPN3P20807 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CAPN3P20807 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CAPN3P20807 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CAPN3P20807 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
CAPN3P20807 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.16■□□□□ 0.02
CAPN3P20807 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CAPN3P20807 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.16■□□□□ 0.02
CAPN3P20807 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.16■□□□□ 0.02
CAPN3P20807 AC005089.1-201ENST00000619486 2241 ntBASIC15.16■□□□□ 0.02
CAPN3P20807 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CAPN3P20807 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CAPN3P20807 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CAPN3P20807 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CAPN3P20807 FGD5P1-202ENST00000614866 2498 ntBASIC15.16■□□□□ 0.02
CAPN3P20807 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.16■□□□□ 0.02
CAPN3P20807 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CAPN3P20807 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CAPN3P20807 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CAPN3P20807 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CAPN3P20807 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.16■□□□□ 0.02
CAPN3P20807 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.16■□□□□ 0.02
CAPN3P20807 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CAPN3P20807 AC005034.1-201ENST00000426657 489 ntBASIC15.16■□□□□ 0.02
CAPN3P20807 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.16■□□□□ 0.02
CAPN3P20807 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CAPN3P20807 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.16■□□□□ 0.02
CAPN3P20807 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.16■□□□□ 0.02
CAPN3P20807 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.16■□□□□ 0.02
CAPN3P20807 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.16■□□□□ 0.02
CAPN3P20807 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CAPN3P20807 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CAPN3P20807 KRT19P2-202ENST00000557173 1012 ntBASIC15.16■□□□□ 0.02
CAPN3P20807 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CAPN3P20807 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC15.16■□□□□ 0.02
CAPN3P20807 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.16■□□□□ 0.02
CAPN3P20807 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.16■□□□□ 0.02
CAPN3P20807 AC018845.2-201ENST00000568326 409 ntBASIC15.16■□□□□ 0.02
CAPN3P20807 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.16■□□□□ 0.02
CAPN3P20807 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.16■□□□□ 0.02
CAPN3P20807 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.16■□□□□ 0.02
CAPN3P20807 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.16■□□□□ 0.02
CAPN3P20807 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
CAPN3P20807 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.16■□□□□ 0.02
CAPN3P20807 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CAPN3P20807 AC232323.1-201ENST00000540724 2099 ntBASIC15.16■□□□□ 0.02
CAPN3P20807 REXO1L5P-201ENST00000622260 2098 ntBASIC15.16■□□□□ 0.02
CAPN3P20807 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms