Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLTAP09496 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC17.22■□□□□ 0.35
CLTAP09496 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLTAP09496 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLTAP09496 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLTAP09496 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLTAP09496 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC17.22■□□□□ 0.35
CLTAP09496 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLTAP09496 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC17.22■□□□□ 0.35
CLTAP09496 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC17.22■□□□□ 0.35
CLTAP09496 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CLTAP09496 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
CLTAP09496 LINC01115-203ENST00000606068 577 ntBASIC17.22■□□□□ 0.35
CLTAP09496 AC004790.1-201ENST00000612686 536 ntBASIC17.22■□□□□ 0.35
CLTAP09496 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLTAP09496 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLTAP09496 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLTAP09496 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CLTAP09496 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLTAP09496 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLTAP09496 AP005117.1-202ENST00000581724 1908 ntBASIC17.21■□□□□ 0.35
CLTAP09496 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLTAP09496 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17.21■□□□□ 0.35
CLTAP09496 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CLTAP09496 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLTAP09496 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.21■□□□□ 0.35
CLTAP09496 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLTAP09496 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC17.21■□□□□ 0.35
CLTAP09496 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CLTAP09496 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLTAP09496 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLTAP09496 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CLTAP09496 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLTAP09496 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLTAP09496 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CLTAP09496 RAC2-202ENST00000401529 569 ntTSL 4 BASIC17.21■□□□□ 0.35
CLTAP09496 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC17.21■□□□□ 0.35
CLTAP09496 USP40-206ENST00000443711 628 ntTSL 2 BASIC17.21■□□□□ 0.35
CLTAP09496 AL589987.1-201ENST00000453380 819 ntBASIC17.21■□□□□ 0.35
CLTAP09496 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLTAP09496 AC093004.1-201ENST00000508850 424 ntBASIC17.21■□□□□ 0.35
CLTAP09496 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLTAP09496 FTH1-202ENST00000526640 786 ntTSL 2 BASIC17.21■□□□□ 0.35
CLTAP09496 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC17.21■□□□□ 0.35
CLTAP09496 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
CLTAP09496 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC17.21■□□□□ 0.35
CLTAP09496 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLTAP09496 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC17.21■□□□□ 0.35
CLTAP09496 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLTAP09496 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CLTAP09496 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.21■□□□□ 0.34
CLTAP09496 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CLTAP09496 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
CLTAP09496 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLTAP09496 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC17.2■□□□□ 0.34
CLTAP09496 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLTAP09496 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CLTAP09496 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLTAP09496 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLTAP09496 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
CLTAP09496 AL607033.1-201ENST00000623900 1599 ntBASIC17.2■□□□□ 0.34
CLTAP09496 AC104640.1-201ENST00000562617 2109 ntBASIC17.2■□□□□ 0.34
CLTAP09496 AC007541.1-201ENST00000570282 1469 ntBASIC17.2■□□□□ 0.34
CLTAP09496 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLTAP09496 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLTAP09496 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLTAP09496 OSM-203ENST00000403463 464 ntTSL 3 BASIC17.2■□□□□ 0.34
CLTAP09496 AL035633.1-201ENST00000406139 838 ntBASIC17.2■□□□□ 0.34
CLTAP09496 MEP1AP4-201ENST00000423244 1087 ntBASIC17.2■□□□□ 0.34
CLTAP09496 DFFBP1-201ENST00000433250 979 ntBASIC17.2■□□□□ 0.34
CLTAP09496 AL353779.1-201ENST00000434793 351 ntBASIC17.2■□□□□ 0.34
CLTAP09496 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC17.2■□□□□ 0.34
CLTAP09496 MEIS3P1-201ENST00000495167 958 ntBASIC17.2■□□□□ 0.34
CLTAP09496 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC17.2■□□□□ 0.34
CLTAP09496 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC17.2■□□□□ 0.34
CLTAP09496 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLTAP09496 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLTAP09496 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLTAP09496 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLTAP09496 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLTAP09496 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLTAP09496 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLTAP09496 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC17.2■□□□□ 0.34
CLTAP09496 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CLTAP09496 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLTAP09496 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLTAP09496 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLTAP09496 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.2■□□□□ 0.34
CLTAP09496 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLTAP09496 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLTAP09496 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLTAP09496 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLTAP09496 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.2■□□□□ 0.34
CLTAP09496 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLTAP09496 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CLTAP09496 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLTAP09496 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.19■□□□□ 0.34
CLTAP09496 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLTAP09496 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC17.19■□□□□ 0.34
CLTAP09496 AP002414.2-201ENST00000591780 3365 ntBASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms