Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 AC084346.2-201ENST00000607097 949 ntBASIC13.68□□□□□ -0.22
PHF1O43189 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC13.68□□□□□ -0.22
PHF1O43189 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PHF1O43189 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PHF1O43189 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
PHF1O43189 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC13.68□□□□□ -0.22
PHF1O43189 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PHF1O43189 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
PHF1O43189 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PHF1O43189 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
PHF1O43189 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PHF1O43189 AC073439.1-201ENST00000624121 1774 ntBASIC13.68□□□□□ -0.22
PHF1O43189 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PHF1O43189 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PHF1O43189 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
PHF1O43189 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
PHF1O43189 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC13.67□□□□□ -0.22
PHF1O43189 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PHF1O43189 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PHF1O43189 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC13.67□□□□□ -0.22
PHF1O43189 AC112504.1-201ENST00000623415 1841 ntBASIC13.67□□□□□ -0.22
PHF1O43189 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
PHF1O43189 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.67□□□□□ -0.22
PHF1O43189 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
PHF1O43189 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
PHF1O43189 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC13.67□□□□□ -0.22
PHF1O43189 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PHF1O43189 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PHF1O43189 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PHF1O43189 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PHF1O43189 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC13.67□□□□□ -0.22
PHF1O43189 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
PHF1O43189 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
PHF1O43189 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PHF1O43189 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PHF1O43189 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC13.67□□□□□ -0.22
PHF1O43189 PTPA-220ENST00000436883 532 ntTSL 4 BASIC13.67□□□□□ -0.22
PHF1O43189 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC13.67□□□□□ -0.22
PHF1O43189 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC13.67□□□□□ -0.22
PHF1O43189 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC13.67□□□□□ -0.22
PHF1O43189 AC004890.2-204ENST00000481968 304 ntBASIC13.67□□□□□ -0.22
PHF1O43189 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC13.67□□□□□ -0.22
PHF1O43189 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC13.67□□□□□ -0.22
PHF1O43189 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC13.67□□□□□ -0.22
PHF1O43189 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
PHF1O43189 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PHF1O43189 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC13.67□□□□□ -0.22
PHF1O43189 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC13.67□□□□□ -0.22
PHF1O43189 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.67□□□□□ -0.22
PHF1O43189 AC084121.4-201ENST00000641598 221 ntBASIC13.67□□□□□ -0.22
PHF1O43189 AF228730.8-201ENST00000642140 221 ntBASIC13.67□□□□□ -0.22
PHF1O43189 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PHF1O43189 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PHF1O43189 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
PHF1O43189 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
PHF1O43189 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC13.67□□□□□ -0.22
PHF1O43189 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
PHF1O43189 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.67□□□□□ -0.22
PHF1O43189 AC013268.4-201ENST00000637413 2228 ntBASIC13.67□□□□□ -0.22
PHF1O43189 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
PHF1O43189 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PHF1O43189 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PHF1O43189 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PHF1O43189 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
PHF1O43189 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC13.67□□□□□ -0.22
PHF1O43189 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC13.67□□□□□ -0.22
PHF1O43189 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
PHF1O43189 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
PHF1O43189 WARS-232ENST00000556645 2508 ntTSL 5 BASIC13.66□□□□□ -0.22
PHF1O43189 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
PHF1O43189 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC13.66□□□□□ -0.22
PHF1O43189 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.66□□□□□ -0.22
PHF1O43189 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PHF1O43189 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.66□□□□□ -0.22
PHF1O43189 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PHF1O43189 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
PHF1O43189 GPAA1P2-202ENST00000606848 1787 ntBASIC13.66□□□□□ -0.22
PHF1O43189 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
PHF1O43189 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PHF1O43189 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PHF1O43189 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
PHF1O43189 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
PHF1O43189 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
PHF1O43189 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
PHF1O43189 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PHF1O43189 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PHF1O43189 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PHF1O43189 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
PHF1O43189 CD81-202ENST00000381036 880 ntTSL 3 BASIC13.66□□□□□ -0.22
PHF1O43189 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC13.66□□□□□ -0.22
PHF1O43189 AC142381.1-201ENST00000426099 345 ntBASIC13.66□□□□□ -0.22
PHF1O43189 AC092580.3-201ENST00000430932 139 ntBASIC13.66□□□□□ -0.22
PHF1O43189 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC13.66□□□□□ -0.22
PHF1O43189 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC13.66□□□□□ -0.22
PHF1O43189 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC13.66□□□□□ -0.22
PHF1O43189 GATD1-206ENST00000526325 756 ntTSL 5 BASIC13.66□□□□□ -0.22
PHF1O43189 QPRT-203ENST00000562473 579 ntTSL 3 BASIC13.66□□□□□ -0.22
PHF1O43189 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC13.66□□□□□ -0.22
PHF1O43189 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PHF1O43189 AC017083.2-201ENST00000608069 979 ntBASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms