Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
AP3B1O00203 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP3B1O00203 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.9■□□□□ 0.14
AP3B1O00203 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.9■□□□□ 0.14
AP3B1O00203 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP3B1O00203 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP3B1O00203 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP3B1O00203 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
AP3B1O00203 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC15.9■□□□□ 0.14
AP3B1O00203 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC15.9■□□□□ 0.14
AP3B1O00203 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC15.9■□□□□ 0.14
AP3B1O00203 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.9■□□□□ 0.14
AP3B1O00203 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.9■□□□□ 0.14
AP3B1O00203 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.9■□□□□ 0.14
AP3B1O00203 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.9■□□□□ 0.14
AP3B1O00203 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP3B1O00203 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP3B1O00203 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP3B1O00203 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.9■□□□□ 0.14
AP3B1O00203 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP3B1O00203 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
AP3B1O00203 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.9■□□□□ 0.14
AP3B1O00203 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
AP3B1O00203 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP3B1O00203 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.9■□□□□ 0.14
AP3B1O00203 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
AP3B1O00203 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP3B1O00203 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
AP3B1O00203 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
AP3B1O00203 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.89■□□□□ 0.13
AP3B1O00203 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP3B1O00203 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
AP3B1O00203 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
AP3B1O00203 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.89■□□□□ 0.13
AP3B1O00203 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
AP3B1O00203 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
AP3B1O00203 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP3B1O00203 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
AP3B1O00203 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.89■□□□□ 0.13
AP3B1O00203 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
AP3B1O00203 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP3B1O00203 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
AP3B1O00203 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.89■□□□□ 0.13
AP3B1O00203 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP3B1O00203 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.89■□□□□ 0.13
AP3B1O00203 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC15.89■□□□□ 0.13
AP3B1O00203 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC15.89■□□□□ 0.13
AP3B1O00203 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.89■□□□□ 0.13
AP3B1O00203 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.89■□□□□ 0.13
AP3B1O00203 DHDH-204ENST00000523250 634 ntTSL 5 BASIC15.89■□□□□ 0.13
AP3B1O00203 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
AP3B1O00203 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
AP3B1O00203 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
AP3B1O00203 MIR4453-201ENST00000584019 89 ntBASIC15.89■□□□□ 0.13
AP3B1O00203 AL589739.1-201ENST00000607720 493 ntBASIC15.89■□□□□ 0.13
AP3B1O00203 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC15.89■□□□□ 0.13
AP3B1O00203 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.89■□□□□ 0.13
AP3B1O00203 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
AP3B1O00203 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP3B1O00203 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
AP3B1O00203 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.89■□□□□ 0.13
AP3B1O00203 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.89■□□□□ 0.13
AP3B1O00203 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC15.89■□□□□ 0.13
AP3B1O00203 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP3B1O00203 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP3B1O00203 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP3B1O00203 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
AP3B1O00203 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.89■□□□□ 0.13
AP3B1O00203 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP3B1O00203 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
AP3B1O00203 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
AP3B1O00203 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
AP3B1O00203 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP3B1O00203 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.88■□□□□ 0.13
AP3B1O00203 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP3B1O00203 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.88■□□□□ 0.13
AP3B1O00203 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
AP3B1O00203 AC148477.4-201ENST00000613430 1793 ntBASIC15.88■□□□□ 0.13
AP3B1O00203 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.88■□□□□ 0.13
AP3B1O00203 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.88■□□□□ 0.13
AP3B1O00203 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.88■□□□□ 0.13
AP3B1O00203 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP3B1O00203 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.88■□□□□ 0.13
AP3B1O00203 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP3B1O00203 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
AP3B1O00203 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
AP3B1O00203 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.88■□□□□ 0.13
AP3B1O00203 CNN2P11-201ENST00000429351 262 ntBASIC15.88■□□□□ 0.13
AP3B1O00203 AP000347.1-202ENST00000435868 847 ntBASIC15.88■□□□□ 0.13
AP3B1O00203 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
AP3B1O00203 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
AP3B1O00203 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.88■□□□□ 0.13
AP3B1O00203 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.88■□□□□ 0.13
AP3B1O00203 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.88■□□□□ 0.13
AP3B1O00203 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.88■□□□□ 0.13
AP3B1O00203 SNHG9-202ENST00000564014 471 ntBASIC15.88■□□□□ 0.13
AP3B1O00203 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
AP3B1O00203 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.88■□□□□ 0.13
AP3B1O00203 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.88■□□□□ 0.13
AP3B1O00203 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms