Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CCM2LQ9NUG4 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CCM2LQ9NUG4 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.03■□□□□ -0
CCM2LQ9NUG4 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CCM2LQ9NUG4 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.03■□□□□ -0
CCM2LQ9NUG4 AC108073.2-201ENST00000464002 357 ntBASIC15.03■□□□□ -0
CCM2LQ9NUG4 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
CCM2LQ9NUG4 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
CCM2LQ9NUG4 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.03■□□□□ -0
CCM2LQ9NUG4 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.03■□□□□ -0
CCM2LQ9NUG4 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.03■□□□□ -0
CCM2LQ9NUG4 AL031432.2-201ENST00000566714 459 ntBASIC15.03■□□□□ -0
CCM2LQ9NUG4 AL928711.1-201ENST00000570165 459 ntBASIC15.03■□□□□ -0
CCM2LQ9NUG4 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.03■□□□□ -0
CCM2LQ9NUG4 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.03■□□□□ -0
CCM2LQ9NUG4 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
CCM2LQ9NUG4 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.03■□□□□ -0
CCM2LQ9NUG4 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CCM2LQ9NUG4 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.03■□□□□ -0
CCM2LQ9NUG4 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CCM2LQ9NUG4 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.03■□□□□ -0
CCM2LQ9NUG4 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CCM2LQ9NUG4 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CCM2LQ9NUG4 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.03■□□□□ -0
CCM2LQ9NUG4 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CCM2LQ9NUG4 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CCM2LQ9NUG4 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CCM2LQ9NUG4 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.03■□□□□ -0
CCM2LQ9NUG4 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CCM2LQ9NUG4 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CCM2LQ9NUG4 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CCM2LQ9NUG4 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
CCM2LQ9NUG4 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.03■□□□□ -0
CCM2LQ9NUG4 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CCM2LQ9NUG4 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.02■□□□□ -0
CCM2LQ9NUG4 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
CCM2LQ9NUG4 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.02■□□□□ -0
CCM2LQ9NUG4 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
CCM2LQ9NUG4 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.02■□□□□ -0
CCM2LQ9NUG4 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CCM2LQ9NUG4 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CCM2LQ9NUG4 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CCM2LQ9NUG4 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
CCM2LQ9NUG4 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.02■□□□□ -0
CCM2LQ9NUG4 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.02■□□□□ -0
CCM2LQ9NUG4 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CCM2LQ9NUG4 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CCM2LQ9NUG4 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
CCM2LQ9NUG4 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.02■□□□□ -0
CCM2LQ9NUG4 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.02■□□□□ -0
CCM2LQ9NUG4 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CCM2LQ9NUG4 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CCM2LQ9NUG4 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.02■□□□□ -0
CCM2LQ9NUG4 HCG4B-203ENST00000450128 991 ntBASIC15.02■□□□□ -0
CCM2LQ9NUG4 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.02■□□□□ -0
CCM2LQ9NUG4 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.02■□□□□ -0
CCM2LQ9NUG4 MIR4321-201ENST00000592276 80 ntBASIC15.02■□□□□ -0
CCM2LQ9NUG4 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.02■□□□□ -0
CCM2LQ9NUG4 AC093512.1-201ENST00000617969 520 ntBASIC15.02■□□□□ -0
CCM2LQ9NUG4 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CCM2LQ9NUG4 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCM2LQ9NUG4 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.02□□□□□ -0.01
CCM2LQ9NUG4 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.02□□□□□ -0.01
CCM2LQ9NUG4 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
CCM2LQ9NUG4 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCM2LQ9NUG4 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCM2LQ9NUG4 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CCM2LQ9NUG4 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.02□□□□□ -0.01
CCM2LQ9NUG4 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CCM2LQ9NUG4 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.02□□□□□ -0.01
CCM2LQ9NUG4 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CCM2LQ9NUG4 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCM2LQ9NUG4 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCM2LQ9NUG4 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.02□□□□□ -0.01
CCM2LQ9NUG4 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCM2LQ9NUG4 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.01□□□□□ -0.01
CCM2LQ9NUG4 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
CCM2LQ9NUG4 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCM2LQ9NUG4 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.01□□□□□ -0.01
CCM2LQ9NUG4 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCM2LQ9NUG4 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCM2LQ9NUG4 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCM2LQ9NUG4 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCM2LQ9NUG4 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CCM2LQ9NUG4 AC148477.4-201ENST00000613430 1793 ntBASIC15.01□□□□□ -0.01
CCM2LQ9NUG4 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCM2LQ9NUG4 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCM2LQ9NUG4 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCM2LQ9NUG4 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCM2LQ9NUG4 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.01□□□□□ -0.01
CCM2LQ9NUG4 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.01□□□□□ -0.01
CCM2LQ9NUG4 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.01□□□□□ -0.01
CCM2LQ9NUG4 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC15.01□□□□□ -0.01
CCM2LQ9NUG4 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCM2LQ9NUG4 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCM2LQ9NUG4 PMS2P4-201ENST00000412466 1052 ntBASIC15.01□□□□□ -0.01
CCM2LQ9NUG4 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.01□□□□□ -0.01
CCM2LQ9NUG4 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.01□□□□□ -0.01
CCM2LQ9NUG4 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.01□□□□□ -0.01
CCM2LQ9NUG4 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms