Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC12.58□□□□□ -0.4
CHRDL1Q9BU40 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC12.58□□□□□ -0.4
CHRDL1Q9BU40 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC12.58□□□□□ -0.4
CHRDL1Q9BU40 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CHRDL1Q9BU40 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
CHRDL1Q9BU40 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
CHRDL1Q9BU40 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC12.58□□□□□ -0.4
CHRDL1Q9BU40 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC12.58□□□□□ -0.4
CHRDL1Q9BU40 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CHRDL1Q9BU40 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CHRDL1Q9BU40 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC12.58□□□□□ -0.4
CHRDL1Q9BU40 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC12.58□□□□□ -0.4
CHRDL1Q9BU40 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC12.58□□□□□ -0.4
CHRDL1Q9BU40 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CHRDL1Q9BU40 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
CHRDL1Q9BU40 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CHRDL1Q9BU40 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC12.58□□□□□ -0.4
CHRDL1Q9BU40 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC12.58□□□□□ -0.4
CHRDL1Q9BU40 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CHRDL1Q9BU40 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CHRDL1Q9BU40 PPT1-215ENST00000641471 2368 ntBASIC12.58□□□□□ -0.4
CHRDL1Q9BU40 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC12.58□□□□□ -0.4
CHRDL1Q9BU40 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC12.58□□□□□ -0.4
CHRDL1Q9BU40 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC12.58□□□□□ -0.4
CHRDL1Q9BU40 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC12.58□□□□□ -0.4
CHRDL1Q9BU40 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CHRDL1Q9BU40 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CHRDL1Q9BU40 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CHRDL1Q9BU40 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CHRDL1Q9BU40 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
CHRDL1Q9BU40 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CHRDL1Q9BU40 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC12.58□□□□□ -0.4
CHRDL1Q9BU40 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CHRDL1Q9BU40 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
CHRDL1Q9BU40 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC12.58□□□□□ -0.4
CHRDL1Q9BU40 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CHRDL1Q9BU40 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CHRDL1Q9BU40 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC12.58□□□□□ -0.4
CHRDL1Q9BU40 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
CHRDL1Q9BU40 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CHRDL1Q9BU40 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CHRDL1Q9BU40 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CHRDL1Q9BU40 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC12.57□□□□□ -0.4
CHRDL1Q9BU40 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
CHRDL1Q9BU40 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC12.57□□□□□ -0.4
CHRDL1Q9BU40 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
CHRDL1Q9BU40 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CHRDL1Q9BU40 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CHRDL1Q9BU40 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CHRDL1Q9BU40 AC008677.1-201ENST00000519230 1561 ntBASIC12.57□□□□□ -0.4
CHRDL1Q9BU40 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CHRDL1Q9BU40 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CHRDL1Q9BU40 GOLGA2P9-201ENST00000596977 1937 ntBASIC12.57□□□□□ -0.4
CHRDL1Q9BU40 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CHRDL1Q9BU40 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CHRDL1Q9BU40 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CHRDL1Q9BU40 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CHRDL1Q9BU40 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CHRDL1Q9BU40 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CHRDL1Q9BU40 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
CHRDL1Q9BU40 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CHRDL1Q9BU40 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
CHRDL1Q9BU40 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CHRDL1Q9BU40 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
CHRDL1Q9BU40 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CHRDL1Q9BU40 PMP22-202ENST00000395936 816 ntTSL 3 BASIC12.57□□□□□ -0.4
CHRDL1Q9BU40 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC12.57□□□□□ -0.4
CHRDL1Q9BU40 HAUS4P1-201ENST00000406739 1145 ntBASIC12.57□□□□□ -0.4
CHRDL1Q9BU40 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC12.57□□□□□ -0.4
CHRDL1Q9BU40 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC12.57□□□□□ -0.4
CHRDL1Q9BU40 ADH5P3-201ENST00000433842 1137 ntBASIC12.57□□□□□ -0.4
CHRDL1Q9BU40 FAM86C2P-203ENST00000528684 1004 ntBASIC12.57□□□□□ -0.4
CHRDL1Q9BU40 INO80E-210ENST00000567705 880 ntTSL 3 BASIC12.57□□□□□ -0.4
CHRDL1Q9BU40 AC027307.2-201ENST00000591252 911 ntBASIC12.57□□□□□ -0.4
CHRDL1Q9BU40 AC073389.1-201ENST00000595595 795 ntBASIC12.57□□□□□ -0.4
CHRDL1Q9BU40 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CHRDL1Q9BU40 CITED2-204ENST00000618718 901 ntTSL 2 BASIC12.57□□□□□ -0.4
CHRDL1Q9BU40 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CHRDL1Q9BU40 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CHRDL1Q9BU40 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC12.57□□□□□ -0.4
CHRDL1Q9BU40 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
CHRDL1Q9BU40 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CHRDL1Q9BU40 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC12.57□□□□□ -0.4
CHRDL1Q9BU40 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CHRDL1Q9BU40 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
CHRDL1Q9BU40 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC12.57□□□□□ -0.4
CHRDL1Q9BU40 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CHRDL1Q9BU40 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CHRDL1Q9BU40 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
CHRDL1Q9BU40 CICP13-201ENST00000422015 2789 ntBASIC12.57□□□□□ -0.4
CHRDL1Q9BU40 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
CHRDL1Q9BU40 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC12.57□□□□□ -0.4
CHRDL1Q9BU40 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CHRDL1Q9BU40 FOXO1B-201ENST00000504678 1527 ntBASIC12.57□□□□□ -0.4
CHRDL1Q9BU40 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
CHRDL1Q9BU40 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CHRDL1Q9BU40 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC12.57□□□□□ -0.4
CHRDL1Q9BU40 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CHRDL1Q9BU40 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
CHRDL1Q9BU40 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms