Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SMOQ99835 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMOQ99835 AC132872.4-202ENST00000622924 2756 ntBASIC16.38■□□□□ 0.21
SMOQ99835 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMOQ99835 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SMOQ99835 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMOQ99835 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SMOQ99835 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SMOQ99835 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMOQ99835 AC020658.6-201ENST00000623564 1870 ntBASIC16.38■□□□□ 0.21
SMOQ99835 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMOQ99835 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMOQ99835 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMOQ99835 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SMOQ99835 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC16.38■□□□□ 0.21
SMOQ99835 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC16.38■□□□□ 0.21
SMOQ99835 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC16.38■□□□□ 0.21
SMOQ99835 KRT17P7-201ENST00000451704 1104 ntBASIC16.38■□□□□ 0.21
SMOQ99835 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC16.38■□□□□ 0.21
SMOQ99835 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SMOQ99835 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SMOQ99835 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SMOQ99835 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
SMOQ99835 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
SMOQ99835 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.38■□□□□ 0.21
SMOQ99835 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC16.38■□□□□ 0.21
SMOQ99835 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC16.38■□□□□ 0.21
SMOQ99835 AC239800.4-201ENST00000603712 296 ntBASIC16.38■□□□□ 0.21
SMOQ99835 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.38■□□□□ 0.21
SMOQ99835 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SMOQ99835 CU634019.7-201ENST00000624153 1185 ntBASIC16.38■□□□□ 0.21
SMOQ99835 FP236241.2-201ENST00000624906 1185 ntBASIC16.38■□□□□ 0.21
SMOQ99835 ABBA01031660.1-201ENST00000635219 756 ntBASIC16.38■□□□□ 0.21
SMOQ99835 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMOQ99835 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SMOQ99835 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMOQ99835 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMOQ99835 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SMOQ99835 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMOQ99835 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMOQ99835 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMOQ99835 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.38■□□□□ 0.21
SMOQ99835 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
SMOQ99835 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SMOQ99835 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMOQ99835 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.38■□□□□ 0.21
SMOQ99835 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMOQ99835 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC16.38■□□□□ 0.21
SMOQ99835 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.37■□□□□ 0.21
SMOQ99835 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
SMOQ99835 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.37■□□□□ 0.21
SMOQ99835 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
SMOQ99835 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SMOQ99835 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC16.37■□□□□ 0.21
SMOQ99835 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SMOQ99835 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SMOQ99835 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SMOQ99835 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SMOQ99835 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SMOQ99835 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SMOQ99835 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
SMOQ99835 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SMOQ99835 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.37■□□□□ 0.21
SMOQ99835 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
SMOQ99835 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SMOQ99835 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SMOQ99835 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.37■□□□□ 0.21
SMOQ99835 SOCS2P1-201ENST00000417727 557 ntBASIC16.37■□□□□ 0.21
SMOQ99835 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC16.37■□□□□ 0.21
SMOQ99835 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SMOQ99835 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC16.37■□□□□ 0.21
SMOQ99835 GIMAP3P-201ENST00000495150 836 ntBASIC16.37■□□□□ 0.21
SMOQ99835 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.37■□□□□ 0.21
SMOQ99835 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.37■□□□□ 0.21
SMOQ99835 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC16.37■□□□□ 0.21
SMOQ99835 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.37■□□□□ 0.21
SMOQ99835 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
SMOQ99835 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SMOQ99835 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SMOQ99835 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SMOQ99835 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SMOQ99835 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.37■□□□□ 0.21
SMOQ99835 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.37■□□□□ 0.21
SMOQ99835 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SMOQ99835 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SMOQ99835 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
SMOQ99835 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
SMOQ99835 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
SMOQ99835 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SMOQ99835 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SMOQ99835 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.36■□□□□ 0.21
SMOQ99835 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.36■□□□□ 0.21
SMOQ99835 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.36■□□□□ 0.21
SMOQ99835 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SMOQ99835 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
SMOQ99835 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SMOQ99835 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SMOQ99835 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.36■□□□□ 0.21
SMOQ99835 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SMOQ99835 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms