Protein–RNA interactions for Protein: Q969W0

SPTSSA, Serine palmitoyltransferase small subunit A, humanhuman

Predictions only

Length 71 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSAQ969W0 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SPTSSAQ969W0 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SPTSSAQ969W0 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SPTSSAQ969W0 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SPTSSAQ969W0 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SPTSSAQ969W0 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SPTSSAQ969W0 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
SPTSSAQ969W0 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SPTSSAQ969W0 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SPTSSAQ969W0 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.81□□□□□ -0.2
SPTSSAQ969W0 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SPTSSAQ969W0 AZGP1P1-201ENST00000411909 902 ntBASIC13.81□□□□□ -0.2
SPTSSAQ969W0 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.81□□□□□ -0.2
SPTSSAQ969W0 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
SPTSSAQ969W0 AC136604.1-201ENST00000418535 575 ntBASIC13.81□□□□□ -0.2
SPTSSAQ969W0 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC13.81□□□□□ -0.2
SPTSSAQ969W0 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC13.81□□□□□ -0.2
SPTSSAQ969W0 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC13.81□□□□□ -0.2
SPTSSAQ969W0 AC004967.1-201ENST00000453589 447 ntBASIC13.81□□□□□ -0.2
SPTSSAQ969W0 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SPTSSAQ969W0 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.81□□□□□ -0.2
SPTSSAQ969W0 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC13.81□□□□□ -0.2
SPTSSAQ969W0 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC13.81□□□□□ -0.2
SPTSSAQ969W0 HNRNPUP1-201ENST00000554987 333 ntBASIC13.81□□□□□ -0.2
SPTSSAQ969W0 MIR4453-201ENST00000584019 89 ntBASIC13.81□□□□□ -0.2
SPTSSAQ969W0 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC13.81□□□□□ -0.2
SPTSSAQ969W0 METTL23-205ENST00000588302 925 ntTSL 5 BASIC13.81□□□□□ -0.2
SPTSSAQ969W0 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC13.81□□□□□ -0.2
SPTSSAQ969W0 RAB34-224ENST00000636513 888 ntTSL 5 BASIC13.81□□□□□ -0.2
SPTSSAQ969W0 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SPTSSAQ969W0 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SPTSSAQ969W0 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
SPTSSAQ969W0 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
SPTSSAQ969W0 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.81□□□□□ -0.2
SPTSSAQ969W0 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SPTSSAQ969W0 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.81□□□□□ -0.2
SPTSSAQ969W0 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SPTSSAQ969W0 GRAMD4P3-201ENST00000621665 1669 ntBASIC13.81□□□□□ -0.2
SPTSSAQ969W0 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.81□□□□□ -0.2
SPTSSAQ969W0 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SPTSSAQ969W0 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC13.81□□□□□ -0.2
SPTSSAQ969W0 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SPTSSAQ969W0 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SPTSSAQ969W0 GOLGA6L17P-202ENST00000614358 1398 ntBASIC13.81□□□□□ -0.2
SPTSSAQ969W0 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SPTSSAQ969W0 SBF1P1-201ENST00000444527 5631 ntBASIC13.81□□□□□ -0.2
SPTSSAQ969W0 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
SPTSSAQ969W0 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC13.8□□□□□ -0.2
SPTSSAQ969W0 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SPTSSAQ969W0 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC13.8□□□□□ -0.2
SPTSSAQ969W0 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SPTSSAQ969W0 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.8□□□□□ -0.2
SPTSSAQ969W0 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.8□□□□□ -0.2
SPTSSAQ969W0 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SPTSSAQ969W0 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SPTSSAQ969W0 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SPTSSAQ969W0 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SPTSSAQ969W0 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SPTSSAQ969W0 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC13.8□□□□□ -0.2
SPTSSAQ969W0 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SPTSSAQ969W0 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
SPTSSAQ969W0 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SPTSSAQ969W0 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SPTSSAQ969W0 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SPTSSAQ969W0 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC13.8□□□□□ -0.2
SPTSSAQ969W0 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SPTSSAQ969W0 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.8□□□□□ -0.2
SPTSSAQ969W0 KRT18P13-201ENST00000400056 1290 ntBASIC13.8□□□□□ -0.2
SPTSSAQ969W0 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SPTSSAQ969W0 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC13.8□□□□□ -0.2
SPTSSAQ969W0 BANF1P1-201ENST00000553684 263 ntBASIC13.8□□□□□ -0.2
SPTSSAQ969W0 AC134684.3-201ENST00000641758 218 ntBASIC13.8□□□□□ -0.2
SPTSSAQ969W0 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SPTSSAQ969W0 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SPTSSAQ969W0 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SPTSSAQ969W0 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SPTSSAQ969W0 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SPTSSAQ969W0 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SPTSSAQ969W0 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
SPTSSAQ969W0 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SPTSSAQ969W0 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
SPTSSAQ969W0 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.8□□□□□ -0.2
SPTSSAQ969W0 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SPTSSAQ969W0 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC13.8□□□□□ -0.2
SPTSSAQ969W0 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.8□□□□□ -0.2
SPTSSAQ969W0 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.8□□□□□ -0.2
SPTSSAQ969W0 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SPTSSAQ969W0 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
SPTSSAQ969W0 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SPTSSAQ969W0 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SPTSSAQ969W0 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.8□□□□□ -0.2
SPTSSAQ969W0 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC13.79□□□□□ -0.2
SPTSSAQ969W0 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC13.79□□□□□ -0.2
SPTSSAQ969W0 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SPTSSAQ969W0 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
SPTSSAQ969W0 CETN4P-206ENST00000642099 2168 ntBASIC13.79□□□□□ -0.2
SPTSSAQ969W0 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SPTSSAQ969W0 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.79□□□□□ -0.2
SPTSSAQ969W0 AC013268.4-201ENST00000637413 2228 ntBASIC13.79□□□□□ -0.2
SPTSSAQ969W0 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms