Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDH19Q8TAB3 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDH19Q8TAB3 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
PCDH19Q8TAB3 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDH19Q8TAB3 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDH19Q8TAB3 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDH19Q8TAB3 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
PCDH19Q8TAB3 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDH19Q8TAB3 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDH19Q8TAB3 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDH19Q8TAB3 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDH19Q8TAB3 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDH19Q8TAB3 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDH19Q8TAB3 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.22■□□□□ 0.19
PCDH19Q8TAB3 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
PCDH19Q8TAB3 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDH19Q8TAB3 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.22■□□□□ 0.19
PCDH19Q8TAB3 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDH19Q8TAB3 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDH19Q8TAB3 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
PCDH19Q8TAB3 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDH19Q8TAB3 AC091951.1-201ENST00000512854 2465 ntBASIC16.22■□□□□ 0.19
PCDH19Q8TAB3 FER1L4-210ENST00000615531 5998 ntBASIC16.22■□□□□ 0.19
PCDH19Q8TAB3 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
PCDH19Q8TAB3 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDH19Q8TAB3 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.22■□□□□ 0.19
PCDH19Q8TAB3 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
PCDH19Q8TAB3 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDH19Q8TAB3 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
PCDH19Q8TAB3 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.22■□□□□ 0.19
PCDH19Q8TAB3 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
PCDH19Q8TAB3 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.22■□□□□ 0.19
PCDH19Q8TAB3 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDH19Q8TAB3 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.22■□□□□ 0.19
PCDH19Q8TAB3 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDH19Q8TAB3 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.22■□□□□ 0.19
PCDH19Q8TAB3 AL390754.1-201ENST00000619088 582 ntBASIC16.22■□□□□ 0.19
PCDH19Q8TAB3 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.22■□□□□ 0.19
PCDH19Q8TAB3 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.22■□□□□ 0.19
PCDH19Q8TAB3 AF228730.6-201ENST00000641497 218 ntBASIC16.22■□□□□ 0.19
PCDH19Q8TAB3 AC084121.3-201ENST00000641716 218 ntBASIC16.22■□□□□ 0.19
PCDH19Q8TAB3 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PCDH19Q8TAB3 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDH19Q8TAB3 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.22■□□□□ 0.19
PCDH19Q8TAB3 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PCDH19Q8TAB3 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDH19Q8TAB3 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDH19Q8TAB3 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDH19Q8TAB3 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDH19Q8TAB3 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.22■□□□□ 0.19
PCDH19Q8TAB3 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDH19Q8TAB3 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDH19Q8TAB3 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDH19Q8TAB3 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDH19Q8TAB3 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDH19Q8TAB3 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.22■□□□□ 0.19
PCDH19Q8TAB3 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDH19Q8TAB3 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDH19Q8TAB3 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDH19Q8TAB3 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDH19Q8TAB3 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDH19Q8TAB3 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.21■□□□□ 0.19
PCDH19Q8TAB3 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDH19Q8TAB3 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDH19Q8TAB3 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.21■□□□□ 0.19
PCDH19Q8TAB3 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDH19Q8TAB3 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
PCDH19Q8TAB3 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.21■□□□□ 0.19
PCDH19Q8TAB3 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDH19Q8TAB3 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.21■□□□□ 0.19
PCDH19Q8TAB3 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PCDH19Q8TAB3 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.21■□□□□ 0.19
PCDH19Q8TAB3 RPL13P2-201ENST00000440687 659 ntBASIC16.21■□□□□ 0.19
PCDH19Q8TAB3 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.21■□□□□ 0.19
PCDH19Q8TAB3 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PCDH19Q8TAB3 RN7SL618P-201ENST00000477850 296 ntBASIC16.21■□□□□ 0.19
PCDH19Q8TAB3 SLED1-202ENST00000512051 380 ntBASIC16.21■□□□□ 0.19
PCDH19Q8TAB3 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.21■□□□□ 0.19
PCDH19Q8TAB3 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.21■□□□□ 0.19
PCDH19Q8TAB3 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.21■□□□□ 0.19
PCDH19Q8TAB3 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.21■□□□□ 0.19
PCDH19Q8TAB3 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.21■□□□□ 0.19
PCDH19Q8TAB3 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.21■□□□□ 0.19
PCDH19Q8TAB3 LINC01115-203ENST00000606068 577 ntBASIC16.21■□□□□ 0.19
PCDH19Q8TAB3 AL844908.2-201ENST00000609461 460 ntBASIC16.21■□□□□ 0.19
PCDH19Q8TAB3 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDH19Q8TAB3 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.21■□□□□ 0.19
PCDH19Q8TAB3 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PCDH19Q8TAB3 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PCDH19Q8TAB3 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
PCDH19Q8TAB3 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.21■□□□□ 0.19
PCDH19Q8TAB3 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDH19Q8TAB3 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDH19Q8TAB3 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDH19Q8TAB3 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.21■□□□□ 0.19
PCDH19Q8TAB3 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
PCDH19Q8TAB3 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PCDH19Q8TAB3 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
PCDH19Q8TAB3 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PCDH19Q8TAB3 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.21■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms