Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AC105917.1-201ENST00000506637 2539 ntBASIC24.19■■□□□ 1.46
VPS8Q8N3P4 AGK-211ENST00000629555 2765 ntTSL 5 BASIC24.19■■□□□ 1.46
VPS8Q8N3P4 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
VPS8Q8N3P4 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC24.19■■□□□ 1.46
VPS8Q8N3P4 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC24.19■■□□□ 1.46
VPS8Q8N3P4 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC24.18■■□□□ 1.46
VPS8Q8N3P4 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
VPS8Q8N3P4 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
VPS8Q8N3P4 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
VPS8Q8N3P4 LBX2-201ENST00000341396 886 ntTSL 3 BASIC24.18■■□□□ 1.46
VPS8Q8N3P4 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC24.18■■□□□ 1.46
VPS8Q8N3P4 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC24.18■■□□□ 1.46
VPS8Q8N3P4 NUS1P3-201ENST00000423502 862 ntBASIC24.18■■□□□ 1.46
VPS8Q8N3P4 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
VPS8Q8N3P4 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC24.18■■□□□ 1.46
VPS8Q8N3P4 ZBTB45P1-201ENST00000452761 1456 ntBASIC24.18■■□□□ 1.46
VPS8Q8N3P4 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC24.18■■□□□ 1.46
VPS8Q8N3P4 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC24.18■■□□□ 1.46
VPS8Q8N3P4 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC24.18■■□□□ 1.46
VPS8Q8N3P4 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC24.18■■□□□ 1.46
VPS8Q8N3P4 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC24.18■■□□□ 1.46
VPS8Q8N3P4 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC24.18■■□□□ 1.46
VPS8Q8N3P4 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
VPS8Q8N3P4 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
VPS8Q8N3P4 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC24.18■■□□□ 1.46
VPS8Q8N3P4 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
VPS8Q8N3P4 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
VPS8Q8N3P4 MIR6775-201ENST00000617557 69 ntBASIC24.18■■□□□ 1.46
VPS8Q8N3P4 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC24.18■■□□□ 1.46
VPS8Q8N3P4 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC24.18■■□□□ 1.46
VPS8Q8N3P4 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
VPS8Q8N3P4 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC24.18■■□□□ 1.46
VPS8Q8N3P4 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
VPS8Q8N3P4 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
VPS8Q8N3P4 MST1L-201ENST00000442552 2185 ntBASIC24.18■■□□□ 1.46
VPS8Q8N3P4 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC24.18■■□□□ 1.46
VPS8Q8N3P4 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC24.18■■□□□ 1.46
VPS8Q8N3P4 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
VPS8Q8N3P4 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
VPS8Q8N3P4 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
VPS8Q8N3P4 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
VPS8Q8N3P4 ZBTB12BP-201ENST00000314232 1122 ntBASIC24.18■■□□□ 1.46
VPS8Q8N3P4 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
VPS8Q8N3P4 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
VPS8Q8N3P4 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC24.18■■□□□ 1.46
VPS8Q8N3P4 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
VPS8Q8N3P4 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
VPS8Q8N3P4 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC24.18■■□□□ 1.46
VPS8Q8N3P4 LSM5-207ENST00000410044 687 ntTSL 3 BASIC24.18■■□□□ 1.46
VPS8Q8N3P4 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
VPS8Q8N3P4 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC24.18■■□□□ 1.46
VPS8Q8N3P4 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC24.18■■□□□ 1.46
VPS8Q8N3P4 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
VPS8Q8N3P4 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
VPS8Q8N3P4 LCK-206ENST00000373564 2137 ntTSL 5 BASIC24.17■■□□□ 1.46
VPS8Q8N3P4 API5-202ENST00000420461 2009 ntTSL 2 BASIC24.17■■□□□ 1.46
VPS8Q8N3P4 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC24.17■■□□□ 1.46
VPS8Q8N3P4 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
VPS8Q8N3P4 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
VPS8Q8N3P4 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
VPS8Q8N3P4 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
VPS8Q8N3P4 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
VPS8Q8N3P4 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC24.17■■□□□ 1.46
VPS8Q8N3P4 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
VPS8Q8N3P4 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
VPS8Q8N3P4 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
VPS8Q8N3P4 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
VPS8Q8N3P4 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC24.17■■□□□ 1.46
VPS8Q8N3P4 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC24.17■■□□□ 1.46
VPS8Q8N3P4 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC24.17■■□□□ 1.46
VPS8Q8N3P4 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
VPS8Q8N3P4 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC24.17■■□□□ 1.46
VPS8Q8N3P4 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC24.17■■□□□ 1.46
VPS8Q8N3P4 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC24.17■■□□□ 1.46
VPS8Q8N3P4 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC24.17■■□□□ 1.46
VPS8Q8N3P4 SERF2-217ENST00000630046 862 ntTSL 5 BASIC24.17■■□□□ 1.46
VPS8Q8N3P4 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC24.17■■□□□ 1.46
VPS8Q8N3P4 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
VPS8Q8N3P4 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
VPS8Q8N3P4 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC24.17■■□□□ 1.46
VPS8Q8N3P4 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
VPS8Q8N3P4 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
VPS8Q8N3P4 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
VPS8Q8N3P4 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
VPS8Q8N3P4 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
VPS8Q8N3P4 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
VPS8Q8N3P4 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC24.16■■□□□ 1.46
VPS8Q8N3P4 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
VPS8Q8N3P4 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
VPS8Q8N3P4 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC24.16■■□□□ 1.46
VPS8Q8N3P4 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC24.16■■□□□ 1.46
VPS8Q8N3P4 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
VPS8Q8N3P4 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
VPS8Q8N3P4 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC24.16■■□□□ 1.46
VPS8Q8N3P4 CNN2P8-201ENST00000421872 913 ntBASIC24.16■■□□□ 1.46
VPS8Q8N3P4 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC24.16■■□□□ 1.46
VPS8Q8N3P4 AL590640.2-201ENST00000457038 527 ntBASIC24.16■■□□□ 1.46
VPS8Q8N3P4 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
VPS8Q8N3P4 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
VPS8Q8N3P4 INO80C-210ENST00000590757 595 ntTSL 2 BASIC24.16■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms