Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC18.17■□□□□ 0.5
SHROOM1Q2M3G4 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SHROOM1Q2M3G4 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SHROOM1Q2M3G4 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SHROOM1Q2M3G4 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SHROOM1Q2M3G4 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC18.17■□□□□ 0.5
SHROOM1Q2M3G4 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SHROOM1Q2M3G4 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC18.17■□□□□ 0.5
SHROOM1Q2M3G4 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC18.17■□□□□ 0.5
SHROOM1Q2M3G4 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC18.17■□□□□ 0.5
SHROOM1Q2M3G4 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC18.17■□□□□ 0.5
SHROOM1Q2M3G4 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC18.17■□□□□ 0.5
SHROOM1Q2M3G4 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC18.17■□□□□ 0.5
SHROOM1Q2M3G4 AC010328.2-201ENST00000597698 1111 ntBASIC18.17■□□□□ 0.5
SHROOM1Q2M3G4 AC008687.7-202ENST00000637404 953 ntBASIC18.17■□□□□ 0.5
SHROOM1Q2M3G4 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SHROOM1Q2M3G4 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SHROOM1Q2M3G4 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SHROOM1Q2M3G4 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.17■□□□□ 0.5
SHROOM1Q2M3G4 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SHROOM1Q2M3G4 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SHROOM1Q2M3G4 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SHROOM1Q2M3G4 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC18.17■□□□□ 0.5
SHROOM1Q2M3G4 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SHROOM1Q2M3G4 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SHROOM1Q2M3G4 KRT8P44-201ENST00000441609 1350 ntBASIC18.17■□□□□ 0.5
SHROOM1Q2M3G4 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC18.17■□□□□ 0.5
SHROOM1Q2M3G4 ACE-203ENST00000413513 2237 ntTSL 2 BASIC18.17■□□□□ 0.5
SHROOM1Q2M3G4 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SHROOM1Q2M3G4 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SHROOM1Q2M3G4 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC18.16■□□□□ 0.5
SHROOM1Q2M3G4 AL118508.1-201ENST00000613502 2345 ntBASIC18.16■□□□□ 0.5
SHROOM1Q2M3G4 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SHROOM1Q2M3G4 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC18.16■□□□□ 0.5
SHROOM1Q2M3G4 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SHROOM1Q2M3G4 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SHROOM1Q2M3G4 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
SHROOM1Q2M3G4 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC18.16■□□□□ 0.5
SHROOM1Q2M3G4 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SHROOM1Q2M3G4 LARP4-220ENST00000615080 856 ntTSL 5 BASIC18.16■□□□□ 0.5
SHROOM1Q2M3G4 AP005019.2-201ENST00000615104 511 ntBASIC18.16■□□□□ 0.5
SHROOM1Q2M3G4 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SHROOM1Q2M3G4 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC18.16■□□□□ 0.5
SHROOM1Q2M3G4 AC138951.2-201ENST00000623455 1161 ntBASIC18.16■□□□□ 0.5
SHROOM1Q2M3G4 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC18.16■□□□□ 0.5
SHROOM1Q2M3G4 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SHROOM1Q2M3G4 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SHROOM1Q2M3G4 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC18.16■□□□□ 0.5
SHROOM1Q2M3G4 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SHROOM1Q2M3G4 KRT8P35-201ENST00000483942 1338 ntBASIC18.16■□□□□ 0.5
SHROOM1Q2M3G4 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC18.16■□□□□ 0.5
SHROOM1Q2M3G4 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SHROOM1Q2M3G4 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SHROOM1Q2M3G4 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SHROOM1Q2M3G4 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC18.16■□□□□ 0.5
SHROOM1Q2M3G4 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
SHROOM1Q2M3G4 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC18.16■□□□□ 0.5
SHROOM1Q2M3G4 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
SHROOM1Q2M3G4 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SHROOM1Q2M3G4 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SHROOM1Q2M3G4 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SHROOM1Q2M3G4 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SHROOM1Q2M3G4 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SHROOM1Q2M3G4 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SHROOM1Q2M3G4 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC18.15■□□□□ 0.5
SHROOM1Q2M3G4 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SHROOM1Q2M3G4 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC18.15■□□□□ 0.5
SHROOM1Q2M3G4 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
SHROOM1Q2M3G4 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SHROOM1Q2M3G4 MIR326-201ENST00000362220 95 ntBASIC18.15■□□□□ 0.5
SHROOM1Q2M3G4 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SHROOM1Q2M3G4 PGGT1BP2-201ENST00000398621 1028 ntBASIC18.15■□□□□ 0.5
SHROOM1Q2M3G4 SUN1-204ENST00000403868 978 ntTSL 2 BASIC18.15■□□□□ 0.5
SHROOM1Q2M3G4 KLF2P2-201ENST00000416807 1039 ntBASIC18.15■□□□□ 0.5
SHROOM1Q2M3G4 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SHROOM1Q2M3G4 C2orf27AP3-201ENST00000434123 579 ntBASIC18.15■□□□□ 0.5
SHROOM1Q2M3G4 YBX1P6-201ENST00000442962 1002 ntBASIC18.15■□□□□ 0.5
SHROOM1Q2M3G4 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SHROOM1Q2M3G4 FAM86HP-204ENST00000513466 959 ntBASIC18.15■□□□□ 0.5
SHROOM1Q2M3G4 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC18.15■□□□□ 0.5
SHROOM1Q2M3G4 C2orf69P2-201ENST00000562032 1123 ntBASIC18.15■□□□□ 0.5
SHROOM1Q2M3G4 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC18.15■□□□□ 0.5
SHROOM1Q2M3G4 RN7SL560P-201ENST00000577943 264 ntBASIC18.15■□□□□ 0.5
SHROOM1Q2M3G4 MIR4741-201ENST00000579822 90 ntBASIC18.15■□□□□ 0.5
SHROOM1Q2M3G4 ECM1P1-201ENST00000604092 1279 ntBASIC18.15■□□□□ 0.5
SHROOM1Q2M3G4 AC244093.1-201ENST00000610837 814 ntBASIC18.15■□□□□ 0.5
SHROOM1Q2M3G4 AL354718.3-201ENST00000616414 581 ntBASIC18.15■□□□□ 0.5
SHROOM1Q2M3G4 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SHROOM1Q2M3G4 GPR39-203ENST00000622084 900 ntTSL 5 BASIC18.15■□□□□ 0.5
SHROOM1Q2M3G4 CR382287.1-201ENST00000623954 586 ntBASIC18.15■□□□□ 0.5
SHROOM1Q2M3G4 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SHROOM1Q2M3G4 CYP2T1P-202ENST00000641596 2535 ntBASIC18.15■□□□□ 0.5
SHROOM1Q2M3G4 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SHROOM1Q2M3G4 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SHROOM1Q2M3G4 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SHROOM1Q2M3G4 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SHROOM1Q2M3G4 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC18.15■□□□□ 0.5
SHROOM1Q2M3G4 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC18.15■□□□□ 0.5
SHROOM1Q2M3G4 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
SHROOM1Q2M3G4 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC18.14■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms