Protein–RNA interactions for Protein: Q2M3C7

SPHKAP, A-kinase anchor protein SPHKAP, humanhuman

Predictions only

Length 1,700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHKAPQ2M3C7 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SPHKAPQ2M3C7 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC22.06■■□□□ 1.12
SPHKAPQ2M3C7 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC22.06■■□□□ 1.12
SPHKAPQ2M3C7 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC22.06■■□□□ 1.12
SPHKAPQ2M3C7 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SPHKAPQ2M3C7 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SPHKAPQ2M3C7 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SPHKAPQ2M3C7 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SPHKAPQ2M3C7 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC22.06■■□□□ 1.12
SPHKAPQ2M3C7 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC22.06■■□□□ 1.12
SPHKAPQ2M3C7 AC126915.1-201ENST00000522847 1038 ntBASIC22.06■■□□□ 1.12
SPHKAPQ2M3C7 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC22.06■■□□□ 1.12
SPHKAPQ2M3C7 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC22.06■■□□□ 1.12
SPHKAPQ2M3C7 AC091812.3-201ENST00000621362 345 ntBASIC22.06■■□□□ 1.12
SPHKAPQ2M3C7 AC022748.3-201ENST00000621828 275 ntBASIC22.06■■□□□ 1.12
SPHKAPQ2M3C7 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC22.06■■□□□ 1.12
SPHKAPQ2M3C7 AC138627.1-207ENST00000641560 1006 ntBASIC22.06■■□□□ 1.12
SPHKAPQ2M3C7 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SPHKAPQ2M3C7 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SPHKAPQ2M3C7 KRT8P4-201ENST00000509735 1454 ntBASIC22.06■■□□□ 1.12
SPHKAPQ2M3C7 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SPHKAPQ2M3C7 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC22.06■■□□□ 1.12
SPHKAPQ2M3C7 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC22.05■■□□□ 1.12
SPHKAPQ2M3C7 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC22.05■■□□□ 1.12
SPHKAPQ2M3C7 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
SPHKAPQ2M3C7 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SPHKAPQ2M3C7 AL513523.2-202ENST00000427283 2040 ntBASIC22.05■■□□□ 1.12
SPHKAPQ2M3C7 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SPHKAPQ2M3C7 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SPHKAPQ2M3C7 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC22.05■■□□□ 1.12
SPHKAPQ2M3C7 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC22.05■■□□□ 1.12
SPHKAPQ2M3C7 MIR4683-201ENST00000579659 81 ntBASIC22.05■■□□□ 1.12
SPHKAPQ2M3C7 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC22.05■■□□□ 1.12
SPHKAPQ2M3C7 AL645939.5-201ENST00000606834 243 ntBASIC22.05■■□□□ 1.12
SPHKAPQ2M3C7 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC22.05■■□□□ 1.12
SPHKAPQ2M3C7 AP001505.2-201ENST00000616815 443 ntBASIC22.05■■□□□ 1.12
SPHKAPQ2M3C7 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
SPHKAPQ2M3C7 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC22.05■■□□□ 1.12
SPHKAPQ2M3C7 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SPHKAPQ2M3C7 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC22.04■■□□□ 1.12
SPHKAPQ2M3C7 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
SPHKAPQ2M3C7 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SPHKAPQ2M3C7 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
SPHKAPQ2M3C7 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC22.04■■□□□ 1.12
SPHKAPQ2M3C7 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SPHKAPQ2M3C7 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SPHKAPQ2M3C7 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SPHKAPQ2M3C7 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC22.04■■□□□ 1.12
SPHKAPQ2M3C7 AC106872.11-201ENST00000605838 421 ntBASIC22.04■■□□□ 1.12
SPHKAPQ2M3C7 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
SPHKAPQ2M3C7 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
SPHKAPQ2M3C7 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SPHKAPQ2M3C7 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SPHKAPQ2M3C7 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC22.04■■□□□ 1.12
SPHKAPQ2M3C7 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
SPHKAPQ2M3C7 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SPHKAPQ2M3C7 SLC9A7P1-202ENST00000556476 2239 ntBASIC22.04■■□□□ 1.12
SPHKAPQ2M3C7 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SPHKAPQ2M3C7 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC22.04■■□□□ 1.12
SPHKAPQ2M3C7 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
SPHKAPQ2M3C7 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC22.03■■□□□ 1.12
SPHKAPQ2M3C7 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SPHKAPQ2M3C7 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SPHKAPQ2M3C7 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC22.03■■□□□ 1.12
SPHKAPQ2M3C7 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC22.03■■□□□ 1.12
SPHKAPQ2M3C7 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC22.03■■□□□ 1.12
SPHKAPQ2M3C7 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC22.03■■□□□ 1.12
SPHKAPQ2M3C7 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
SPHKAPQ2M3C7 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC22.03■■□□□ 1.12
SPHKAPQ2M3C7 MIR3619-201ENST00000579667 83 ntBASIC22.03■■□□□ 1.12
SPHKAPQ2M3C7 AC007663.3-201ENST00000609632 465 ntBASIC22.03■■□□□ 1.12
SPHKAPQ2M3C7 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC22.03■■□□□ 1.12
SPHKAPQ2M3C7 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC22.03■■□□□ 1.12
SPHKAPQ2M3C7 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SPHKAPQ2M3C7 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
SPHKAPQ2M3C7 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
SPHKAPQ2M3C7 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
SPHKAPQ2M3C7 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC22.03■■□□□ 1.12
SPHKAPQ2M3C7 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC22.03■■□□□ 1.12
SPHKAPQ2M3C7 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SPHKAPQ2M3C7 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
SPHKAPQ2M3C7 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC22.03■■□□□ 1.12
SPHKAPQ2M3C7 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SPHKAPQ2M3C7 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SPHKAPQ2M3C7 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SPHKAPQ2M3C7 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC22.03■■□□□ 1.12
SPHKAPQ2M3C7 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SPHKAPQ2M3C7 AC005077.2-201ENST00000449786 690 ntBASIC22.03■■□□□ 1.12
SPHKAPQ2M3C7 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC22.03■■□□□ 1.12
SPHKAPQ2M3C7 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC22.03■■□□□ 1.12
SPHKAPQ2M3C7 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SPHKAPQ2M3C7 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SPHKAPQ2M3C7 RN7SL574P-201ENST00000581512 297 ntBASIC22.03■■□□□ 1.12
SPHKAPQ2M3C7 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC22.03■■□□□ 1.12
SPHKAPQ2M3C7 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC22.02■■□□□ 1.12
SPHKAPQ2M3C7 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC22.02■■□□□ 1.12
SPHKAPQ2M3C7 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
SPHKAPQ2M3C7 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SPHKAPQ2M3C7 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC22.02■■□□□ 1.12
SPHKAPQ2M3C7 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms