Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL16A1Q07092 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC20.5■□□□□ 0.87
COL16A1Q07092 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC20.5■□□□□ 0.87
COL16A1Q07092 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL16A1Q07092 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
COL16A1Q07092 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL16A1Q07092 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL16A1Q07092 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL16A1Q07092 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC20.5■□□□□ 0.87
COL16A1Q07092 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
COL16A1Q07092 KRT17P4-201ENST00000429445 819 ntBASIC20.5■□□□□ 0.87
COL16A1Q07092 AC012441.2-201ENST00000444843 739 ntBASIC20.5■□□□□ 0.87
COL16A1Q07092 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC20.5■□□□□ 0.87
COL16A1Q07092 NEU3-207ENST00000534628 746 ntTSL 2 BASIC20.5■□□□□ 0.87
COL16A1Q07092 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
COL16A1Q07092 MIR4472-1-201ENST00000584349 80 ntBASIC20.5■□□□□ 0.87
COL16A1Q07092 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC20.5■□□□□ 0.87
COL16A1Q07092 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL16A1Q07092 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
COL16A1Q07092 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL16A1Q07092 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
COL16A1Q07092 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL16A1Q07092 AC015909.3-201ENST00000572855 1794 ntBASIC20.5■□□□□ 0.87
COL16A1Q07092 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
COL16A1Q07092 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COL16A1Q07092 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC20.5■□□□□ 0.87
COL16A1Q07092 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.5■□□□□ 0.87
COL16A1Q07092 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
COL16A1Q07092 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
COL16A1Q07092 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL16A1Q07092 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
COL16A1Q07092 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
COL16A1Q07092 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
COL16A1Q07092 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
COL16A1Q07092 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC20.49■□□□□ 0.87
COL16A1Q07092 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC20.49■□□□□ 0.87
COL16A1Q07092 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC20.49■□□□□ 0.87
COL16A1Q07092 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC20.49■□□□□ 0.87
COL16A1Q07092 ARPP19-206ENST00000564163 718 ntTSL 2 BASIC20.49■□□□□ 0.87
COL16A1Q07092 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC20.49■□□□□ 0.87
COL16A1Q07092 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC20.49■□□□□ 0.87
COL16A1Q07092 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC20.49■□□□□ 0.87
COL16A1Q07092 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC20.49■□□□□ 0.87
COL16A1Q07092 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
COL16A1Q07092 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL16A1Q07092 AC011477.6-201ENST00000604980 1927 ntBASIC20.49■□□□□ 0.87
COL16A1Q07092 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL16A1Q07092 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL16A1Q07092 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
COL16A1Q07092 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
COL16A1Q07092 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC20.49■□□□□ 0.87
COL16A1Q07092 INE2-201ENST00000630399 1874 ntBASIC20.49■□□□□ 0.87
COL16A1Q07092 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
COL16A1Q07092 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL16A1Q07092 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
COL16A1Q07092 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL16A1Q07092 AREG-202ENST00000502307 956 ntTSL 5 BASIC20.49■□□□□ 0.87
COL16A1Q07092 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
COL16A1Q07092 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
COL16A1Q07092 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC20.49■□□□□ 0.87
COL16A1Q07092 AC093752.3-201ENST00000567343 901 ntBASIC20.49■□□□□ 0.87
COL16A1Q07092 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
COL16A1Q07092 DDX5-235ENST00000630471 473 ntTSL 4 BASIC20.49■□□□□ 0.87
COL16A1Q07092 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COL16A1Q07092 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
COL16A1Q07092 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
COL16A1Q07092 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC20.48■□□□□ 0.87
COL16A1Q07092 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL16A1Q07092 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL16A1Q07092 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL16A1Q07092 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC20.48■□□□□ 0.87
COL16A1Q07092 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL16A1Q07092 AC011840.2-201ENST00000563063 1520 ntBASIC20.48■□□□□ 0.87
COL16A1Q07092 UROS-201ENST00000368774 744 ntTSL 2 BASIC20.48■□□□□ 0.87
COL16A1Q07092 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC20.48■□□□□ 0.87
COL16A1Q07092 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC20.48■□□□□ 0.87
COL16A1Q07092 BRI3P1-201ENST00000440440 378 ntBASIC20.48■□□□□ 0.87
COL16A1Q07092 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC20.48■□□□□ 0.87
COL16A1Q07092 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL16A1Q07092 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
COL16A1Q07092 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC20.48■□□□□ 0.87
COL16A1Q07092 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL16A1Q07092 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL16A1Q07092 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
COL16A1Q07092 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL16A1Q07092 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL16A1Q07092 BAK1P1-201ENST00000317045 636 ntBASIC20.47■□□□□ 0.87
COL16A1Q07092 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL16A1Q07092 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL16A1Q07092 GCSHP3-201ENST00000431120 391 ntBASIC20.47■□□□□ 0.87
COL16A1Q07092 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
COL16A1Q07092 AC093909.3-201ENST00000504783 336 ntBASIC20.47■□□□□ 0.87
COL16A1Q07092 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
COL16A1Q07092 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC20.47■□□□□ 0.87
COL16A1Q07092 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC20.47■□□□□ 0.87
COL16A1Q07092 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC20.47■□□□□ 0.87
COL16A1Q07092 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
COL16A1Q07092 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL16A1Q07092 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
COL16A1Q07092 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms