Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.45■□□□□ 0.22
IRX4P78413 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
IRX4P78413 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IRX4P78413 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.45■□□□□ 0.22
IRX4P78413 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC16.45■□□□□ 0.22
IRX4P78413 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
IRX4P78413 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IRX4P78413 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
IRX4P78413 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IRX4P78413 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
IRX4P78413 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
IRX4P78413 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
IRX4P78413 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC16.45■□□□□ 0.22
IRX4P78413 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC16.45■□□□□ 0.22
IRX4P78413 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC16.45■□□□□ 0.22
IRX4P78413 AC009477.1-201ENST00000452936 217 ntBASIC16.45■□□□□ 0.22
IRX4P78413 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.45■□□□□ 0.22
IRX4P78413 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC16.45■□□□□ 0.22
IRX4P78413 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC16.45■□□□□ 0.22
IRX4P78413 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
IRX4P78413 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IRX4P78413 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
IRX4P78413 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.45■□□□□ 0.22
IRX4P78413 HILS1-202ENST00000545329 423 ntBASIC16.45■□□□□ 0.22
IRX4P78413 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.45■□□□□ 0.22
IRX4P78413 AC009407.1-201ENST00000568958 598 ntBASIC16.45■□□□□ 0.22
IRX4P78413 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.45■□□□□ 0.22
IRX4P78413 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.45■□□□□ 0.22
IRX4P78413 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
IRX4P78413 AC008738.7-201ENST00000609744 511 ntBASIC16.45■□□□□ 0.22
IRX4P78413 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.45■□□□□ 0.22
IRX4P78413 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
IRX4P78413 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
IRX4P78413 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.45■□□□□ 0.22
IRX4P78413 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
IRX4P78413 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.45■□□□□ 0.22
IRX4P78413 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IRX4P78413 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
IRX4P78413 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
IRX4P78413 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
IRX4P78413 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IRX4P78413 AC126177.1-201ENST00000547829 2218 ntBASIC16.45■□□□□ 0.22
IRX4P78413 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
IRX4P78413 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IRX4P78413 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.45■□□□□ 0.22
IRX4P78413 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
IRX4P78413 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
IRX4P78413 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
IRX4P78413 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
IRX4P78413 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
IRX4P78413 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.44■□□□□ 0.22
IRX4P78413 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
IRX4P78413 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
IRX4P78413 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
IRX4P78413 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.44■□□□□ 0.22
IRX4P78413 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
IRX4P78413 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.44■□□□□ 0.22
IRX4P78413 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
IRX4P78413 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.44■□□□□ 0.22
IRX4P78413 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
IRX4P78413 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
IRX4P78413 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
IRX4P78413 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
IRX4P78413 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
IRX4P78413 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
IRX4P78413 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.44■□□□□ 0.22
IRX4P78413 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
IRX4P78413 AL353779.1-201ENST00000434793 351 ntBASIC16.44■□□□□ 0.22
IRX4P78413 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.44■□□□□ 0.22
IRX4P78413 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
IRX4P78413 AC105233.2-201ENST00000523697 349 ntBASIC16.44■□□□□ 0.22
IRX4P78413 AF228730.5-201ENST00000530288 346 ntBASIC16.44■□□□□ 0.22
IRX4P78413 API5-211ENST00000534695 560 ntTSL 5 BASIC16.44■□□□□ 0.22
IRX4P78413 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
IRX4P78413 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.44■□□□□ 0.22
IRX4P78413 AC091167.2-201ENST00000579581 588 ntBASIC16.44■□□□□ 0.22
IRX4P78413 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.44■□□□□ 0.22
IRX4P78413 CYP2A7P1-201ENST00000595391 815 ntBASIC16.44■□□□□ 0.22
IRX4P78413 AL132655.2-201ENST00000596276 594 ntBASIC16.44■□□□□ 0.22
IRX4P78413 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.44■□□□□ 0.22
IRX4P78413 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC16.44■□□□□ 0.22
IRX4P78413 AP001350.2-201ENST00000625104 1094 ntBASIC16.44■□□□□ 0.22
IRX4P78413 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.44■□□□□ 0.22
IRX4P78413 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
IRX4P78413 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.44■□□□□ 0.22
IRX4P78413 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
IRX4P78413 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
IRX4P78413 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
IRX4P78413 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
IRX4P78413 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.44■□□□□ 0.22
IRX4P78413 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
IRX4P78413 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
IRX4P78413 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
IRX4P78413 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
IRX4P78413 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.43■□□□□ 0.22
IRX4P78413 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
IRX4P78413 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
IRX4P78413 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
IRX4P78413 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.43■□□□□ 0.22
IRX4P78413 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms