Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLDN20P56880 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLDN20P56880 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CLDN20P56880 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CLDN20P56880 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.47□□□□□ -0.09
CLDN20P56880 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CLDN20P56880 TSSK5P-201ENST00000423978 907 ntBASIC14.47□□□□□ -0.09
CLDN20P56880 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.47□□□□□ -0.09
CLDN20P56880 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.47□□□□□ -0.09
CLDN20P56880 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.47□□□□□ -0.09
CLDN20P56880 AL512638.1-201ENST00000457493 794 ntBASIC14.47□□□□□ -0.09
CLDN20P56880 INGX-202ENST00000489074 768 ntBASIC14.47□□□□□ -0.09
CLDN20P56880 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.47□□□□□ -0.09
CLDN20P56880 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.47□□□□□ -0.09
CLDN20P56880 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CLDN20P56880 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.47□□□□□ -0.09
CLDN20P56880 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLDN20P56880 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CLDN20P56880 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.47□□□□□ -0.09
CLDN20P56880 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.47□□□□□ -0.09
CLDN20P56880 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.47□□□□□ -0.09
CLDN20P56880 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.47□□□□□ -0.09
CLDN20P56880 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CLDN20P56880 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CLDN20P56880 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CLDN20P56880 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLDN20P56880 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CLDN20P56880 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.47□□□□□ -0.09
CLDN20P56880 AC006486.2-201ENST00000624246 2199 ntBASIC14.47□□□□□ -0.09
CLDN20P56880 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
CLDN20P56880 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.47□□□□□ -0.09
CLDN20P56880 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLDN20P56880 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLDN20P56880 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLDN20P56880 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CLDN20P56880 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLDN20P56880 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN20P56880 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN20P56880 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN20P56880 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN20P56880 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CLDN20P56880 AC005089.1-201ENST00000619486 2241 ntBASIC14.46□□□□□ -0.09
CLDN20P56880 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN20P56880 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN20P56880 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN20P56880 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN20P56880 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.46□□□□□ -0.09
CLDN20P56880 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN20P56880 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN20P56880 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN20P56880 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN20P56880 HAUS4P1-201ENST00000406739 1145 ntBASIC14.46□□□□□ -0.09
CLDN20P56880 SPDYE17-201ENST00000412399 783 ntBASIC14.46□□□□□ -0.09
CLDN20P56880 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN20P56880 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.46□□□□□ -0.09
CLDN20P56880 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.46□□□□□ -0.09
CLDN20P56880 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN20P56880 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.46□□□□□ -0.09
CLDN20P56880 AL096865.1-201ENST00000606796 927 ntBASIC14.46□□□□□ -0.09
CLDN20P56880 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.46□□□□□ -0.09
CLDN20P56880 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.46□□□□□ -0.09
CLDN20P56880 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN20P56880 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN20P56880 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLDN20P56880 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CLDN20P56880 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CLDN20P56880 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.46□□□□□ -0.1
CLDN20P56880 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CLDN20P56880 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CLDN20P56880 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
CLDN20P56880 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
CLDN20P56880 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CLDN20P56880 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.46□□□□□ -0.1
CLDN20P56880 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
CLDN20P56880 KRT8P12-202ENST00000472924 1397 ntBASIC14.46□□□□□ -0.1
CLDN20P56880 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
CLDN20P56880 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CLDN20P56880 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.46□□□□□ -0.1
CLDN20P56880 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
CLDN20P56880 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CLDN20P56880 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.45□□□□□ -0.1
CLDN20P56880 AC007292.2-201ENST00000593524 1812 ntBASIC14.45□□□□□ -0.1
CLDN20P56880 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN20P56880 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN20P56880 AC134407.2-201ENST00000625089 1978 ntBASIC14.45□□□□□ -0.1
CLDN20P56880 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN20P56880 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CLDN20P56880 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN20P56880 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN20P56880 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
CLDN20P56880 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.45□□□□□ -0.1
CLDN20P56880 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.45□□□□□ -0.1
CLDN20P56880 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.45□□□□□ -0.1
CLDN20P56880 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.45□□□□□ -0.1
CLDN20P56880 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN20P56880 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
CLDN20P56880 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
CLDN20P56880 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN20P56880 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLDN20P56880 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms