Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
USP11P51784 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17.69■□□□□ 0.42
USP11P51784 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.69■□□□□ 0.42
USP11P51784 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
USP11P51784 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC17.69■□□□□ 0.42
USP11P51784 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
USP11P51784 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP11P51784 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP11P51784 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
USP11P51784 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
USP11P51784 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
USP11P51784 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP11P51784 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP11P51784 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
USP11P51784 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP11P51784 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
USP11P51784 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
USP11P51784 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
USP11P51784 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
USP11P51784 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC17.68■□□□□ 0.42
USP11P51784 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
USP11P51784 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
USP11P51784 GAPDHP40-201ENST00000505218 1006 ntBASIC17.68■□□□□ 0.42
USP11P51784 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC17.68■□□□□ 0.42
USP11P51784 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC17.68■□□□□ 0.42
USP11P51784 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP11P51784 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC17.68■□□□□ 0.42
USP11P51784 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC17.68■□□□□ 0.42
USP11P51784 AC025181.2-201ENST00000606994 802 ntBASIC17.68■□□□□ 0.42
USP11P51784 AL358472.5-202ENST00000641448 1267 ntBASIC17.68■□□□□ 0.42
USP11P51784 AL645728.2-202ENST00000641679 227 ntBASIC17.68■□□□□ 0.42
USP11P51784 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP11P51784 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.68■□□□□ 0.42
USP11P51784 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
USP11P51784 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
USP11P51784 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
USP11P51784 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
USP11P51784 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC17.68■□□□□ 0.42
USP11P51784 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC17.68■□□□□ 0.42
USP11P51784 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP11P51784 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
USP11P51784 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
USP11P51784 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP11P51784 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP11P51784 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP11P51784 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
USP11P51784 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
USP11P51784 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
USP11P51784 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
USP11P51784 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
USP11P51784 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
USP11P51784 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
USP11P51784 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
USP11P51784 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC17.67■□□□□ 0.42
USP11P51784 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
USP11P51784 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
USP11P51784 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
USP11P51784 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
USP11P51784 DRD5P1-201ENST00000456605 1438 ntBASIC17.67■□□□□ 0.42
USP11P51784 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
USP11P51784 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
USP11P51784 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
USP11P51784 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
USP11P51784 AC098614.1-201ENST00000368528 745 ntBASIC17.67■□□□□ 0.42
USP11P51784 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
USP11P51784 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
USP11P51784 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC17.67■□□□□ 0.42
USP11P51784 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC17.67■□□□□ 0.42
USP11P51784 AC026410.3-201ENST00000514280 936 ntBASIC17.67■□□□□ 0.42
USP11P51784 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC17.67■□□□□ 0.42
USP11P51784 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC17.67■□□□□ 0.42
USP11P51784 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC17.67■□□□□ 0.42
USP11P51784 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC17.67■□□□□ 0.42
USP11P51784 AL049840.4-201ENST00000602422 811 ntBASIC17.67■□□□□ 0.42
USP11P51784 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
USP11P51784 AMT-224ENST00000635808 1610 ntTSL 5 BASIC17.67■□□□□ 0.42
USP11P51784 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
USP11P51784 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
USP11P51784 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
USP11P51784 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
USP11P51784 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
USP11P51784 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
USP11P51784 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
USP11P51784 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
USP11P51784 AC087481.3-201ENST00000602886 1894 ntBASIC17.67■□□□□ 0.42
USP11P51784 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
USP11P51784 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
USP11P51784 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC17.67■□□□□ 0.42
USP11P51784 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
USP11P51784 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.67■□□□□ 0.42
USP11P51784 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
USP11P51784 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
USP11P51784 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC17.66■□□□□ 0.42
USP11P51784 AL596257.1-201ENST00000641463 2694 ntBASIC17.66■□□□□ 0.42
USP11P51784 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
USP11P51784 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
USP11P51784 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
USP11P51784 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
USP11P51784 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
USP11P51784 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms