Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 AC074044.1-201ENST00000609673 707 ntBASIC17.13■□□□□ 0.33
CASP4P49662 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CASP4P49662 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CASP4P49662 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CASP4P49662 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CASP4P49662 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CASP4P49662 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CASP4P49662 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CASP4P49662 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CASP4P49662 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC17.13■□□□□ 0.33
CASP4P49662 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CASP4P49662 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CASP4P49662 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC17.12■□□□□ 0.33
CASP4P49662 TSPY26P-202ENST00000565928 3884 ntBASIC17.12■□□□□ 0.33
CASP4P49662 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC17.12■□□□□ 0.33
CASP4P49662 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CASP4P49662 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.12■□□□□ 0.33
CASP4P49662 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC17.12■□□□□ 0.33
CASP4P49662 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC17.12■□□□□ 0.33
CASP4P49662 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC17.12■□□□□ 0.33
CASP4P49662 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CASP4P49662 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CASP4P49662 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC17.12■□□□□ 0.33
CASP4P49662 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC17.12■□□□□ 0.33
CASP4P49662 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC17.12■□□□□ 0.33
CASP4P49662 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.12■□□□□ 0.33
CASP4P49662 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC17.12■□□□□ 0.33
CASP4P49662 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC17.12■□□□□ 0.33
CASP4P49662 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CASP4P49662 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC17.12■□□□□ 0.33
CASP4P49662 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CASP4P49662 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CASP4P49662 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC17.12■□□□□ 0.33
CASP4P49662 AC004461.2-201ENST00000629517 803 ntBASIC17.12■□□□□ 0.33
CASP4P49662 AC004840.1-201ENST00000636359 365 ntBASIC17.12■□□□□ 0.33
CASP4P49662 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC17.12■□□□□ 0.33
CASP4P49662 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
CASP4P49662 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC17.12■□□□□ 0.33
CASP4P49662 MST1L-201ENST00000442552 2185 ntBASIC17.12■□□□□ 0.33
CASP4P49662 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CASP4P49662 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CASP4P49662 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CASP4P49662 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
CASP4P49662 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC17.12■□□□□ 0.33
CASP4P49662 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC17.12■□□□□ 0.33
CASP4P49662 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CASP4P49662 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CASP4P49662 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CASP4P49662 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CASP4P49662 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC17.11■□□□□ 0.33
CASP4P49662 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CASP4P49662 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CASP4P49662 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CASP4P49662 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CASP4P49662 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CASP4P49662 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CASP4P49662 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC17.11■□□□□ 0.33
CASP4P49662 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CASP4P49662 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CASP4P49662 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC17.11■□□□□ 0.33
CASP4P49662 BASP1P1-201ENST00000430708 665 ntBASIC17.11■□□□□ 0.33
CASP4P49662 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC17.11■□□□□ 0.33
CASP4P49662 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC17.11■□□□□ 0.33
CASP4P49662 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC17.11■□□□□ 0.33
CASP4P49662 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC17.11■□□□□ 0.33
CASP4P49662 AC004790.1-201ENST00000612686 536 ntBASIC17.11■□□□□ 0.33
CASP4P49662 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.11■□□□□ 0.33
CASP4P49662 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CASP4P49662 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CASP4P49662 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC17.11■□□□□ 0.33
CASP4P49662 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC17.11■□□□□ 0.33
CASP4P49662 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CASP4P49662 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CASP4P49662 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CASP4P49662 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CASP4P49662 AC023157.3-201ENST00000619086 2088 ntBASIC17.11■□□□□ 0.33
CASP4P49662 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CASP4P49662 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CASP4P49662 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CASP4P49662 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CASP4P49662 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CASP4P49662 AC022144.1-201ENST00000602255 1580 ntBASIC17.11■□□□□ 0.33
CASP4P49662 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
CASP4P49662 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CASP4P49662 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.1■□□□□ 0.33
CASP4P49662 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CASP4P49662 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CASP4P49662 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CASP4P49662 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
CASP4P49662 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CASP4P49662 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CASP4P49662 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CASP4P49662 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.1■□□□□ 0.33
CASP4P49662 MIR770-201ENST00000390219 98 ntBASIC17.1■□□□□ 0.33
CASP4P49662 AC015922.1-201ENST00000421102 1152 ntBASIC17.1■□□□□ 0.33
CASP4P49662 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
CASP4P49662 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC17.1■□□□□ 0.33
CASP4P49662 TMPRSS11CP-201ENST00000453277 683 ntBASIC17.1■□□□□ 0.33
CASP4P49662 AL589987.1-201ENST00000453380 819 ntBASIC17.1■□□□□ 0.33
CASP4P49662 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms