Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC15.47■□□□□ 0.07
CXCL12P48061 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CXCL12P48061 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC15.47■□□□□ 0.07
CXCL12P48061 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CXCL12P48061 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC15.47■□□□□ 0.07
CXCL12P48061 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC15.47■□□□□ 0.07
CXCL12P48061 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.47■□□□□ 0.07
CXCL12P48061 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
CXCL12P48061 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CXCL12P48061 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CXCL12P48061 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
CXCL12P48061 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CXCL12P48061 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CXCL12P48061 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CXCL12P48061 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.47■□□□□ 0.07
CXCL12P48061 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.47■□□□□ 0.07
CXCL12P48061 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
CXCL12P48061 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CXCL12P48061 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.46■□□□□ 0.07
CXCL12P48061 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.46■□□□□ 0.07
CXCL12P48061 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
CXCL12P48061 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CXCL12P48061 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC15.46■□□□□ 0.07
CXCL12P48061 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
CXCL12P48061 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CXCL12P48061 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CXCL12P48061 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CXCL12P48061 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CXCL12P48061 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
CXCL12P48061 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CXCL12P48061 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CXCL12P48061 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CXCL12P48061 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CXCL12P48061 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
CXCL12P48061 MIR33B-201ENST00000385104 96 ntBASIC15.46■□□□□ 0.07
CXCL12P48061 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
CXCL12P48061 B9D1-203ENST00000395615 805 ntTSL 3 BASIC15.46■□□□□ 0.07
CXCL12P48061 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.46■□□□□ 0.07
CXCL12P48061 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CXCL12P48061 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
CXCL12P48061 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC15.46■□□□□ 0.07
CXCL12P48061 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
CXCL12P48061 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.46■□□□□ 0.07
CXCL12P48061 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
CXCL12P48061 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CXCL12P48061 SUPT4H1P2-201ENST00000501248 353 ntBASIC15.46■□□□□ 0.07
CXCL12P48061 AC005740.2-201ENST00000511085 419 ntBASIC15.46■□□□□ 0.07
CXCL12P48061 NCK2-206ENST00000522586 490 ntTSL 5 BASIC15.46■□□□□ 0.07
CXCL12P48061 AC134698.3-201ENST00000523880 214 ntBASIC15.46■□□□□ 0.07
CXCL12P48061 RN7SL774P-201ENST00000577467 290 ntBASIC15.46■□□□□ 0.07
CXCL12P48061 RN7SL713P-201ENST00000582127 302 ntBASIC15.46■□□□□ 0.07
CXCL12P48061 MIR5572-201ENST00000583188 137 ntBASIC15.46■□□□□ 0.07
CXCL12P48061 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.46■□□□□ 0.07
CXCL12P48061 AC025181.2-201ENST00000606994 802 ntBASIC15.46■□□□□ 0.07
CXCL12P48061 ZACNP1-201ENST00000612259 710 ntBASIC15.46■□□□□ 0.07
CXCL12P48061 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.46■□□□□ 0.07
CXCL12P48061 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.46■□□□□ 0.07
CXCL12P48061 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CXCL12P48061 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CXCL12P48061 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.46■□□□□ 0.07
CXCL12P48061 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CXCL12P48061 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CXCL12P48061 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CXCL12P48061 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
CXCL12P48061 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC15.46■□□□□ 0.06
CXCL12P48061 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CXCL12P48061 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
CXCL12P48061 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
CXCL12P48061 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CXCL12P48061 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CXCL12P48061 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC15.46■□□□□ 0.06
CXCL12P48061 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CXCL12P48061 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.06
CXCL12P48061 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.46■□□□□ 0.06
CXCL12P48061 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CXCL12P48061 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC15.45■□□□□ 0.06
CXCL12P48061 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.45■□□□□ 0.06
CXCL12P48061 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.45■□□□□ 0.06
CXCL12P48061 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
CXCL12P48061 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.45■□□□□ 0.06
CXCL12P48061 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CXCL12P48061 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.45■□□□□ 0.06
CXCL12P48061 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CXCL12P48061 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CXCL12P48061 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CXCL12P48061 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CXCL12P48061 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CXCL12P48061 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC15.45■□□□□ 0.06
CXCL12P48061 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CXCL12P48061 AC104457.1-201ENST00000401024 814 ntBASIC15.45■□□□□ 0.06
CXCL12P48061 AL139094.1-201ENST00000405549 1188 ntBASIC15.45■□□□□ 0.06
CXCL12P48061 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC15.45■□□□□ 0.06
CXCL12P48061 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC15.45■□□□□ 0.06
CXCL12P48061 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC15.45■□□□□ 0.06
CXCL12P48061 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.45■□□□□ 0.06
CXCL12P48061 FGFR3P5-201ENST00000564496 886 ntBASIC15.45■□□□□ 0.06
CXCL12P48061 MIR3907-201ENST00000579424 151 ntBASIC15.45■□□□□ 0.06
CXCL12P48061 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC15.45■□□□□ 0.06
CXCL12P48061 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.45■□□□□ 0.06
CXCL12P48061 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms