Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC19.68■□□□□ 0.74
COL15A1P39059 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC19.68■□□□□ 0.74
COL15A1P39059 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC19.68■□□□□ 0.74
COL15A1P39059 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC19.68■□□□□ 0.74
COL15A1P39059 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC19.68■□□□□ 0.74
COL15A1P39059 NEU3-202ENST00000526068 431 ntTSL 2 BASIC19.68■□□□□ 0.74
COL15A1P39059 AL354989.2-201ENST00000435838 1540 ntBASIC19.68■□□□□ 0.74
COL15A1P39059 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COL15A1P39059 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL15A1P39059 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COL15A1P39059 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC19.67■□□□□ 0.74
COL15A1P39059 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL15A1P39059 AL391005.1-201ENST00000623953 2435 ntBASIC19.67■□□□□ 0.74
COL15A1P39059 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COL15A1P39059 AC138028.6-201ENST00000616106 1482 ntBASIC19.67■□□□□ 0.74
COL15A1P39059 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL15A1P39059 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL15A1P39059 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC19.67■□□□□ 0.74
COL15A1P39059 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC19.67■□□□□ 0.74
COL15A1P39059 AKR7A2P1-201ENST00000460134 915 ntBASIC19.67■□□□□ 0.74
COL15A1P39059 APOA2-204ENST00000464492 530 ntTSL 3 BASIC19.67■□□□□ 0.74
COL15A1P39059 AC104982.3-201ENST00000581995 514 ntBASIC19.67■□□□□ 0.74
COL15A1P39059 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC19.67■□□□□ 0.74
COL15A1P39059 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
COL15A1P39059 AC106872.11-201ENST00000605838 421 ntBASIC19.67■□□□□ 0.74
COL15A1P39059 AC244452.3-201ENST00000636814 210 ntBASIC19.67■□□□□ 0.74
COL15A1P39059 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
COL15A1P39059 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL15A1P39059 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
COL15A1P39059 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC19.67■□□□□ 0.74
COL15A1P39059 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL15A1P39059 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
COL15A1P39059 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL15A1P39059 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL15A1P39059 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC19.66■□□□□ 0.74
COL15A1P39059 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC19.66■□□□□ 0.74
COL15A1P39059 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL15A1P39059 AC148477.4-201ENST00000613430 1793 ntBASIC19.66■□□□□ 0.74
COL15A1P39059 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL15A1P39059 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL15A1P39059 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL15A1P39059 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
COL15A1P39059 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL15A1P39059 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL15A1P39059 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL15A1P39059 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COL15A1P39059 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
COL15A1P39059 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL15A1P39059 KRTAP10-13P-201ENST00000412914 571 ntBASIC19.66■□□□□ 0.74
COL15A1P39059 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC19.66■□□□□ 0.74
COL15A1P39059 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC19.66■□□□□ 0.74
COL15A1P39059 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC19.66■□□□□ 0.74
COL15A1P39059 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
COL15A1P39059 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC19.66■□□□□ 0.74
COL15A1P39059 TBCB-211ENST00000589996 724 ntTSL 3 BASIC19.66■□□□□ 0.74
COL15A1P39059 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL15A1P39059 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC19.66■□□□□ 0.74
COL15A1P39059 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL15A1P39059 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL15A1P39059 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL15A1P39059 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC19.65■□□□□ 0.74
COL15A1P39059 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
COL15A1P39059 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC19.65■□□□□ 0.74
COL15A1P39059 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COL15A1P39059 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
COL15A1P39059 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
COL15A1P39059 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL15A1P39059 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COL15A1P39059 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL15A1P39059 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL15A1P39059 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC19.65■□□□□ 0.74
COL15A1P39059 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COL15A1P39059 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC19.65■□□□□ 0.74
COL15A1P39059 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC19.65■□□□□ 0.74
COL15A1P39059 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COL15A1P39059 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL15A1P39059 HNRNPA1P32-201ENST00000396326 963 ntBASIC19.65■□□□□ 0.74
COL15A1P39059 MIR663B-201ENST00000408361 115 ntBASIC19.65■□□□□ 0.74
COL15A1P39059 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC19.65■□□□□ 0.74
COL15A1P39059 HSPB1P2-201ENST00000448722 546 ntBASIC19.65■□□□□ 0.74
COL15A1P39059 HIST2H2BC-201ENST00000498492 580 ntBASIC19.65■□□□□ 0.74
COL15A1P39059 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC19.65■□□□□ 0.74
COL15A1P39059 RN7SL48P-201ENST00000579283 293 ntBASIC19.65■□□□□ 0.74
COL15A1P39059 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC19.65■□□□□ 0.74
COL15A1P39059 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC19.65■□□□□ 0.74
COL15A1P39059 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC19.65■□□□□ 0.74
COL15A1P39059 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL15A1P39059 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL15A1P39059 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL15A1P39059 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL15A1P39059 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
COL15A1P39059 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL15A1P39059 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
COL15A1P39059 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC19.65■□□□□ 0.74
COL15A1P39059 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COL15A1P39059 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL15A1P39059 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
COL15A1P39059 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
COL15A1P39059 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
COL15A1P39059 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms