Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CPS1P31327 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CPS1P31327 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC21.69■■□□□ 1.06
CPS1P31327 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
CPS1P31327 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC21.68■■□□□ 1.06
CPS1P31327 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
CPS1P31327 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CPS1P31327 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
CPS1P31327 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CPS1P31327 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CPS1P31327 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CPS1P31327 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CPS1P31327 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC21.68■■□□□ 1.06
CPS1P31327 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CPS1P31327 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC21.68■■□□□ 1.06
CPS1P31327 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC21.68■■□□□ 1.06
CPS1P31327 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC21.68■■□□□ 1.06
CPS1P31327 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC21.68■■□□□ 1.06
CPS1P31327 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC21.68■■□□□ 1.06
CPS1P31327 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
CPS1P31327 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CPS1P31327 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC21.68■■□□□ 1.06
CPS1P31327 AC007881.3-201ENST00000608897 607 ntBASIC21.68■■□□□ 1.06
CPS1P31327 AC090164.2-201ENST00000611487 516 ntBASIC21.68■■□□□ 1.06
CPS1P31327 AL136295.7-201ENST00000619226 1200 ntBASIC21.68■■□□□ 1.06
CPS1P31327 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
CPS1P31327 RNF165-205ENST00000588679 2904 ntBASIC21.68■■□□□ 1.06
CPS1P31327 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CPS1P31327 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CPS1P31327 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC21.68■■□□□ 1.06
CPS1P31327 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CPS1P31327 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CPS1P31327 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
CPS1P31327 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CPS1P31327 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CPS1P31327 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CPS1P31327 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC21.67■■□□□ 1.06
CPS1P31327 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CPS1P31327 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC21.67■■□□□ 1.06
CPS1P31327 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CPS1P31327 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CPS1P31327 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CPS1P31327 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CPS1P31327 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC21.67■■□□□ 1.06
CPS1P31327 EIF3FP3-201ENST00000434851 1086 ntBASIC21.67■■□□□ 1.06
CPS1P31327 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC21.67■■□□□ 1.06
CPS1P31327 BUD31-205ENST00000456893 512 ntTSL 5 BASIC21.67■■□□□ 1.06
CPS1P31327 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC21.67■■□□□ 1.06
CPS1P31327 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC21.67■■□□□ 1.06
CPS1P31327 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC21.67■■□□□ 1.06
CPS1P31327 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC21.67■■□□□ 1.06
CPS1P31327 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CPS1P31327 LRRC59-203ENST00000576448 1531 ntBASIC21.67■■□□□ 1.06
CPS1P31327 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CPS1P31327 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
CPS1P31327 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CPS1P31327 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
CPS1P31327 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC21.66■■□□□ 1.06
CPS1P31327 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CPS1P31327 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CPS1P31327 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC21.66■■□□□ 1.06
CPS1P31327 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CPS1P31327 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CPS1P31327 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CPS1P31327 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CPS1P31327 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CPS1P31327 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC21.66■■□□□ 1.06
CPS1P31327 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC21.66■■□□□ 1.06
CPS1P31327 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC21.66■■□□□ 1.06
CPS1P31327 PCBP2-OT1-201ENST00000634357 590 ntBASIC21.66■■□□□ 1.06
CPS1P31327 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CPS1P31327 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CPS1P31327 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
CPS1P31327 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC21.66■■□□□ 1.06
CPS1P31327 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC21.66■■□□□ 1.06
CPS1P31327 AC069224.1-201ENST00000566372 1715 ntBASIC21.66■■□□□ 1.06
CPS1P31327 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CPS1P31327 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC21.66■■□□□ 1.06
CPS1P31327 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CPS1P31327 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
CPS1P31327 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CPS1P31327 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC21.66■■□□□ 1.06
CPS1P31327 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CPS1P31327 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CPS1P31327 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CPS1P31327 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CPS1P31327 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC21.65■■□□□ 1.06
CPS1P31327 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC21.65■■□□□ 1.06
CPS1P31327 PFN2-206ENST00000461930 606 ntTSL 4 BASIC21.65■■□□□ 1.06
CPS1P31327 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CPS1P31327 FO393412.1-201ENST00000619841 382 ntBASIC21.65■■□□□ 1.06
CPS1P31327 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC21.65■■□□□ 1.06
CPS1P31327 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CPS1P31327 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CPS1P31327 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CPS1P31327 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CPS1P31327 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CPS1P31327 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CPS1P31327 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC21.65■■□□□ 1.06
CPS1P31327 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms