Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.86□□□□□ -0.19
UBCP0CG48 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
UBCP0CG48 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
UBCP0CG48 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBCP0CG48 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.86□□□□□ -0.19
UBCP0CG48 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBCP0CG48 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBCP0CG48 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.86□□□□□ -0.19
UBCP0CG48 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC13.86□□□□□ -0.19
UBCP0CG48 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
UBCP0CG48 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
UBCP0CG48 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.86□□□□□ -0.19
UBCP0CG48 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBCP0CG48 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBCP0CG48 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBCP0CG48 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC13.86□□□□□ -0.19
UBCP0CG48 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBCP0CG48 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
UBCP0CG48 AC142381.1-201ENST00000426099 345 ntBASIC13.86□□□□□ -0.19
UBCP0CG48 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
UBCP0CG48 AC009078.2-202ENST00000463353 338 ntBASIC13.86□□□□□ -0.19
UBCP0CG48 RPL13AP23-201ENST00000480739 586 ntBASIC13.86□□□□□ -0.19
UBCP0CG48 CCDC74BP1-201ENST00000508880 1123 ntBASIC13.86□□□□□ -0.19
UBCP0CG48 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC13.86□□□□□ -0.19
UBCP0CG48 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
UBCP0CG48 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC13.86□□□□□ -0.19
UBCP0CG48 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC13.86□□□□□ -0.19
UBCP0CG48 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC13.86□□□□□ -0.19
UBCP0CG48 AC026979.3-201ENST00000607315 403 ntBASIC13.86□□□□□ -0.19
UBCP0CG48 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.86□□□□□ -0.19
UBCP0CG48 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC13.86□□□□□ -0.19
UBCP0CG48 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBCP0CG48 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBCP0CG48 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBCP0CG48 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.86□□□□□ -0.19
UBCP0CG48 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.86□□□□□ -0.19
UBCP0CG48 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
UBCP0CG48 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
UBCP0CG48 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.86□□□□□ -0.19
UBCP0CG48 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
UBCP0CG48 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBCP0CG48 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
UBCP0CG48 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.86□□□□□ -0.19
UBCP0CG48 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
UBCP0CG48 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBCP0CG48 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13.86□□□□□ -0.19
UBCP0CG48 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.86□□□□□ -0.19
UBCP0CG48 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC13.86□□□□□ -0.19
UBCP0CG48 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBCP0CG48 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
UBCP0CG48 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.86□□□□□ -0.19
UBCP0CG48 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
UBCP0CG48 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
UBCP0CG48 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
UBCP0CG48 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UBCP0CG48 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC13.85□□□□□ -0.19
UBCP0CG48 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
UBCP0CG48 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
UBCP0CG48 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
UBCP0CG48 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
UBCP0CG48 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
UBCP0CG48 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UBCP0CG48 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
UBCP0CG48 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UBCP0CG48 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
UBCP0CG48 KRT8P37-201ENST00000451609 1420 ntBASIC13.85□□□□□ -0.19
UBCP0CG48 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
UBCP0CG48 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UBCP0CG48 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
UBCP0CG48 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UBCP0CG48 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC13.85□□□□□ -0.19
UBCP0CG48 HLA-H-201ENST00000383620 1096 ntBASIC13.85□□□□□ -0.19
UBCP0CG48 TFAMP1-201ENST00000412727 736 ntBASIC13.85□□□□□ -0.19
UBCP0CG48 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC13.85□□□□□ -0.19
UBCP0CG48 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC13.85□□□□□ -0.19
UBCP0CG48 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC13.85□□□□□ -0.19
UBCP0CG48 AL139010.1-201ENST00000454878 894 ntBASIC13.85□□□□□ -0.19
UBCP0CG48 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.85□□□□□ -0.19
UBCP0CG48 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC13.85□□□□□ -0.19
UBCP0CG48 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC13.85□□□□□ -0.19
UBCP0CG48 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
UBCP0CG48 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC13.85□□□□□ -0.19
UBCP0CG48 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.85□□□□□ -0.19
UBCP0CG48 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
UBCP0CG48 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.85□□□□□ -0.19
UBCP0CG48 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
UBCP0CG48 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC13.85□□□□□ -0.19
UBCP0CG48 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UBCP0CG48 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UBCP0CG48 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
UBCP0CG48 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
UBCP0CG48 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
UBCP0CG48 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
UBCP0CG48 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC13.85□□□□□ -0.19
UBCP0CG48 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
UBCP0CG48 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
UBCP0CG48 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
UBCP0CG48 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.85□□□□□ -0.19
UBCP0CG48 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC13.84□□□□□ -0.19
UBCP0CG48 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms