Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TIMP1P01033 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.73■□□□□ 0.27
TIMP1P01033 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.72■□□□□ 0.27
TIMP1P01033 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TIMP1P01033 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TIMP1P01033 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.72■□□□□ 0.27
TIMP1P01033 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.72■□□□□ 0.27
TIMP1P01033 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TIMP1P01033 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
TIMP1P01033 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.72■□□□□ 0.27
TIMP1P01033 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TIMP1P01033 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
TIMP1P01033 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
TIMP1P01033 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TIMP1P01033 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TIMP1P01033 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TIMP1P01033 TUBB8P8-201ENST00000458717 1058 ntBASIC16.72■□□□□ 0.27
TIMP1P01033 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC16.72■□□□□ 0.27
TIMP1P01033 AC022616.1-201ENST00000518688 554 ntBASIC16.72■□□□□ 0.27
TIMP1P01033 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC16.72■□□□□ 0.27
TIMP1P01033 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC16.72■□□□□ 0.27
TIMP1P01033 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TIMP1P01033 AL353770.1-201ENST00000614915 403 ntBASIC16.72■□□□□ 0.27
TIMP1P01033 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.72■□□□□ 0.27
TIMP1P01033 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
TIMP1P01033 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TIMP1P01033 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TIMP1P01033 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TIMP1P01033 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TIMP1P01033 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.72■□□□□ 0.27
TIMP1P01033 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TIMP1P01033 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TIMP1P01033 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.71■□□□□ 0.27
TIMP1P01033 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
TIMP1P01033 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.71■□□□□ 0.27
TIMP1P01033 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TIMP1P01033 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TIMP1P01033 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TIMP1P01033 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TIMP1P01033 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.71■□□□□ 0.27
TIMP1P01033 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TIMP1P01033 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TIMP1P01033 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.71■□□□□ 0.27
TIMP1P01033 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
TIMP1P01033 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TIMP1P01033 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TIMP1P01033 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TIMP1P01033 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TIMP1P01033 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TIMP1P01033 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TIMP1P01033 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC16.71■□□□□ 0.27
TIMP1P01033 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TIMP1P01033 AL355334.1-201ENST00000417713 215 ntBASIC16.71■□□□□ 0.27
TIMP1P01033 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC16.71■□□□□ 0.27
TIMP1P01033 MARK2P5-201ENST00000507649 634 ntBASIC16.71■□□□□ 0.27
TIMP1P01033 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC16.71■□□□□ 0.27
TIMP1P01033 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC16.71■□□□□ 0.27
TIMP1P01033 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.71■□□□□ 0.27
TIMP1P01033 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TIMP1P01033 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.71■□□□□ 0.27
TIMP1P01033 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC16.71■□□□□ 0.27
TIMP1P01033 AL603764.1-201ENST00000636452 321 ntBASIC16.71■□□□□ 0.27
TIMP1P01033 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
TIMP1P01033 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.71■□□□□ 0.27
TIMP1P01033 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TIMP1P01033 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
TIMP1P01033 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TIMP1P01033 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TIMP1P01033 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
TIMP1P01033 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.71■□□□□ 0.26
TIMP1P01033 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TIMP1P01033 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TIMP1P01033 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TIMP1P01033 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TIMP1P01033 AC004899.1-201ENST00000424687 1714 ntBASIC16.7■□□□□ 0.26
TIMP1P01033 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TIMP1P01033 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.7■□□□□ 0.26
TIMP1P01033 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TIMP1P01033 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.7■□□□□ 0.26
TIMP1P01033 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TIMP1P01033 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
TIMP1P01033 FZD10-202ENST00000539839 3282 ntBASIC16.7■□□□□ 0.26
TIMP1P01033 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.7■□□□□ 0.26
TIMP1P01033 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
TIMP1P01033 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TIMP1P01033 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TIMP1P01033 AL157791.1-201ENST00000553667 1699 ntBASIC16.7■□□□□ 0.26
TIMP1P01033 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TIMP1P01033 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC16.7■□□□□ 0.26
TIMP1P01033 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TIMP1P01033 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TIMP1P01033 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.7■□□□□ 0.26
TIMP1P01033 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TIMP1P01033 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC16.7■□□□□ 0.26
TIMP1P01033 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC16.7■□□□□ 0.26
TIMP1P01033 AC073352.2-201ENST00000609385 439 ntBASIC16.7■□□□□ 0.26
TIMP1P01033 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TIMP1P01033 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TIMP1P01033 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TIMP1P01033 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms