Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC18.67■□□□□ 0.58
MBD4O95243 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
MBD4O95243 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MBD4O95243 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
MBD4O95243 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC18.67■□□□□ 0.58
MBD4O95243 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MBD4O95243 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC18.67■□□□□ 0.58
MBD4O95243 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
MBD4O95243 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC18.67■□□□□ 0.58
MBD4O95243 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MBD4O95243 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
MBD4O95243 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC18.67■□□□□ 0.58
MBD4O95243 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
MBD4O95243 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
MBD4O95243 PGF-202ENST00000405431 666 ntTSL 5 BASIC18.67■□□□□ 0.58
MBD4O95243 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
MBD4O95243 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
MBD4O95243 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC18.67■□□□□ 0.58
MBD4O95243 TMEM14DP-201ENST00000422205 345 ntBASIC18.67■□□□□ 0.58
MBD4O95243 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC18.67■□□□□ 0.58
MBD4O95243 RPL13AP25-201ENST00000484130 612 ntBASIC18.67■□□□□ 0.58
MBD4O95243 GIMAP3P-201ENST00000495150 836 ntBASIC18.67■□□□□ 0.58
MBD4O95243 GLI4-203ENST00000517468 963 ntTSL 5 BASIC18.67■□□□□ 0.58
MBD4O95243 CFL1-212ENST00000531413 636 ntTSL 3 BASIC18.67■□□□□ 0.58
MBD4O95243 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
MBD4O95243 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
MBD4O95243 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC18.67■□□□□ 0.58
MBD4O95243 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
MBD4O95243 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC18.67■□□□□ 0.58
MBD4O95243 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC18.67■□□□□ 0.58
MBD4O95243 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC18.67■□□□□ 0.58
MBD4O95243 TBCB-211ENST00000589996 724 ntTSL 3 BASIC18.67■□□□□ 0.58
MBD4O95243 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC18.67■□□□□ 0.58
MBD4O95243 AC133539.2-201ENST00000604757 467 ntBASIC18.67■□□□□ 0.58
MBD4O95243 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC18.67■□□□□ 0.58
MBD4O95243 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC18.67■□□□□ 0.58
MBD4O95243 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MBD4O95243 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
MBD4O95243 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MBD4O95243 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MBD4O95243 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
MBD4O95243 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC18.67■□□□□ 0.58
MBD4O95243 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MBD4O95243 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MBD4O95243 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MBD4O95243 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC18.67■□□□□ 0.58
MBD4O95243 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
MBD4O95243 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MBD4O95243 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MBD4O95243 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC18.67■□□□□ 0.58
MBD4O95243 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC18.67■□□□□ 0.58
MBD4O95243 HNRNPA1P48-201ENST00000562726 1377 ntBASIC18.67■□□□□ 0.58
MBD4O95243 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
MBD4O95243 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MBD4O95243 DRD5P1-201ENST00000456605 1438 ntBASIC18.66■□□□□ 0.58
MBD4O95243 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC18.66■□□□□ 0.58
MBD4O95243 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
MBD4O95243 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MBD4O95243 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
MBD4O95243 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
MBD4O95243 AC105250.1-201ENST00000509378 2057 ntBASIC18.66■□□□□ 0.58
MBD4O95243 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
MBD4O95243 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MBD4O95243 C1QBPP1-201ENST00000400117 770 ntBASIC18.66■□□□□ 0.58
MBD4O95243 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC18.66■□□□□ 0.58
MBD4O95243 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC18.66■□□□□ 0.58
MBD4O95243 NAA50-208ENST00000497255 789 ntTSL 5 BASIC18.66■□□□□ 0.58
MBD4O95243 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC18.66■□□□□ 0.58
MBD4O95243 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MBD4O95243 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC18.66■□□□□ 0.58
MBD4O95243 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC18.66■□□□□ 0.58
MBD4O95243 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC18.66■□□□□ 0.58
MBD4O95243 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC18.66■□□□□ 0.58
MBD4O95243 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC18.66■□□□□ 0.58
MBD4O95243 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC18.66■□□□□ 0.58
MBD4O95243 AC107373.2-201ENST00000607735 490 ntBASIC18.66■□□□□ 0.58
MBD4O95243 CU634019.7-201ENST00000624153 1185 ntBASIC18.66■□□□□ 0.58
MBD4O95243 FP236241.2-201ENST00000624906 1185 ntBASIC18.66■□□□□ 0.58
MBD4O95243 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MBD4O95243 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MBD4O95243 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MBD4O95243 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
MBD4O95243 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MBD4O95243 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
MBD4O95243 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC18.66■□□□□ 0.58
MBD4O95243 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MBD4O95243 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
MBD4O95243 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MBD4O95243 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MBD4O95243 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MBD4O95243 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
MBD4O95243 KRT8P22-201ENST00000562317 1415 ntBASIC18.66■□□□□ 0.58
MBD4O95243 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
MBD4O95243 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
MBD4O95243 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
MBD4O95243 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
MBD4O95243 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC18.65■□□□□ 0.58
MBD4O95243 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
MBD4O95243 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC18.65■□□□□ 0.58
MBD4O95243 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms