Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 AL603832.2-201ENST00000566195 2125 ntBASIC15.7■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.7■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.69■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 USP32P1-208ENST00000506594 1164 ntBASIC15.69■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 SLC25A47P1-201ENST00000531577 414 ntBASIC15.69■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.69■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 AP001063.1-201ENST00000568332 529 ntBASIC15.69■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.69■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 AC107373.2-201ENST00000607735 490 ntBASIC15.69■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 AL022328.1-201ENST00000610050 478 ntBASIC15.69■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.69■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.69■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 DRD5P1-201ENST00000456605 1438 ntBASIC15.68■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 AC024909.3-201ENST00000611513 2257 ntBASIC15.68■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.68■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.68■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 AC018665.1-201ENST00000622927 1362 ntBASIC15.68■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC15.68■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.68■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.68■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 AL355864.2-201ENST00000447420 863 ntBASIC15.68■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.68■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 AC068587.3-201ENST00000526613 355 ntBASIC15.68■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.68■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC15.68■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.68■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 AL512343.1-201ENST00000605837 169 ntBASIC15.68■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.68■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 RPSAP52-203ENST00000622976 1023 ntBASIC15.68■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.68■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.68■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.68■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.68■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 AC084018.2-201ENST00000613093 2607 ntBASIC15.67■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.67■□□□□ 0.1
C1QTNF3-AMACRE9PGA6 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms