Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 NME2-201ENST00000393183 568 ntTSL 2 BASIC17.96■□□□□ 0.47
CLIC4Q9Y696 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CLIC4Q9Y696 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.96■□□□□ 0.47
CLIC4Q9Y696 AC254562.1-201ENST00000417586 456 ntBASIC17.96■□□□□ 0.47
CLIC4Q9Y696 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC17.96■□□□□ 0.47
CLIC4Q9Y696 CNN2P11-201ENST00000429351 262 ntBASIC17.96■□□□□ 0.47
CLIC4Q9Y696 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.96■□□□□ 0.47
CLIC4Q9Y696 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLIC4Q9Y696 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLIC4Q9Y696 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC17.96■□□□□ 0.47
CLIC4Q9Y696 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLIC4Q9Y696 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.96■□□□□ 0.47
CLIC4Q9Y696 AC134684.3-201ENST00000641758 218 ntBASIC17.96■□□□□ 0.47
CLIC4Q9Y696 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC17.96■□□□□ 0.47
CLIC4Q9Y696 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLIC4Q9Y696 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLIC4Q9Y696 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLIC4Q9Y696 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLIC4Q9Y696 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC17.96■□□□□ 0.47
CLIC4Q9Y696 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLIC4Q9Y696 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLIC4Q9Y696 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC17.96■□□□□ 0.47
CLIC4Q9Y696 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CLIC4Q9Y696 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLIC4Q9Y696 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CLIC4Q9Y696 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CLIC4Q9Y696 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
CLIC4Q9Y696 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLIC4Q9Y696 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CLIC4Q9Y696 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CLIC4Q9Y696 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CLIC4Q9Y696 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC17.95■□□□□ 0.46
CLIC4Q9Y696 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLIC4Q9Y696 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLIC4Q9Y696 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLIC4Q9Y696 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLIC4Q9Y696 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CLIC4Q9Y696 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLIC4Q9Y696 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.95■□□□□ 0.46
CLIC4Q9Y696 SATB1-217ENST00000493952 626 ntTSL 3 BASIC17.95■□□□□ 0.46
CLIC4Q9Y696 AC109322.1-201ENST00000524499 1264 ntBASIC17.95■□□□□ 0.46
CLIC4Q9Y696 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.95■□□□□ 0.46
CLIC4Q9Y696 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CLIC4Q9Y696 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CLIC4Q9Y696 AL596442.2-201ENST00000610240 980 ntBASIC17.95■□□□□ 0.46
CLIC4Q9Y696 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLIC4Q9Y696 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
CLIC4Q9Y696 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC17.95■□□□□ 0.46
CLIC4Q9Y696 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLIC4Q9Y696 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLIC4Q9Y696 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC17.95■□□□□ 0.46
CLIC4Q9Y696 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLIC4Q9Y696 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLIC4Q9Y696 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLIC4Q9Y696 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLIC4Q9Y696 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLIC4Q9Y696 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.95■□□□□ 0.46
CLIC4Q9Y696 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC17.95■□□□□ 0.46
CLIC4Q9Y696 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLIC4Q9Y696 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLIC4Q9Y696 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
CLIC4Q9Y696 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CLIC4Q9Y696 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLIC4Q9Y696 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CLIC4Q9Y696 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLIC4Q9Y696 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLIC4Q9Y696 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLIC4Q9Y696 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLIC4Q9Y696 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLIC4Q9Y696 AL080243.2-201ENST00000418783 582 ntBASIC17.94■□□□□ 0.46
CLIC4Q9Y696 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.94■□□□□ 0.46
CLIC4Q9Y696 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLIC4Q9Y696 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CLIC4Q9Y696 AP006288.1-201ENST00000446065 395 ntBASIC17.94■□□□□ 0.46
CLIC4Q9Y696 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.94■□□□□ 0.46
CLIC4Q9Y696 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.94■□□□□ 0.46
CLIC4Q9Y696 AL589739.1-201ENST00000607720 493 ntBASIC17.94■□□□□ 0.46
CLIC4Q9Y696 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CLIC4Q9Y696 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC17.94■□□□□ 0.46
CLIC4Q9Y696 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
CLIC4Q9Y696 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CLIC4Q9Y696 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLIC4Q9Y696 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLIC4Q9Y696 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLIC4Q9Y696 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLIC4Q9Y696 AMT-224ENST00000635808 1610 ntTSL 5 BASIC17.94■□□□□ 0.46
CLIC4Q9Y696 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC17.94■□□□□ 0.46
CLIC4Q9Y696 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CLIC4Q9Y696 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CLIC4Q9Y696 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLIC4Q9Y696 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLIC4Q9Y696 AC106881.1-201ENST00000605849 3329 ntBASIC17.93■□□□□ 0.46
CLIC4Q9Y696 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CLIC4Q9Y696 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLIC4Q9Y696 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLIC4Q9Y696 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC17.93■□□□□ 0.46
CLIC4Q9Y696 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CLIC4Q9Y696 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLIC4Q9Y696 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLIC4Q9Y696 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms