Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC11.01□□□□□ -0.65
UBE2D4Q9Y2X8 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC11.01□□□□□ -0.65
UBE2D4Q9Y2X8 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC11.01□□□□□ -0.65
UBE2D4Q9Y2X8 HCG4B-203ENST00000450128 991 ntBASIC11.01□□□□□ -0.65
UBE2D4Q9Y2X8 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
UBE2D4Q9Y2X8 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
UBE2D4Q9Y2X8 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC11.01□□□□□ -0.65
UBE2D4Q9Y2X8 UNC93B6-202ENST00000528242 690 ntBASIC11.01□□□□□ -0.65
UBE2D4Q9Y2X8 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC11.01□□□□□ -0.65
UBE2D4Q9Y2X8 AC061975.2-201ENST00000581722 295 ntBASIC11.01□□□□□ -0.65
UBE2D4Q9Y2X8 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC11.01□□□□□ -0.65
UBE2D4Q9Y2X8 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC11.01□□□□□ -0.65
UBE2D4Q9Y2X8 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC11.01□□□□□ -0.65
UBE2D4Q9Y2X8 AL161645.1-201ENST00000622716 1255 ntBASIC11.01□□□□□ -0.65
UBE2D4Q9Y2X8 FAM215A-202ENST00000632077 792 ntBASIC11.01□□□□□ -0.65
UBE2D4Q9Y2X8 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC11.01□□□□□ -0.65
UBE2D4Q9Y2X8 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC11.01□□□□□ -0.65
UBE2D4Q9Y2X8 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
UBE2D4Q9Y2X8 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
UBE2D4Q9Y2X8 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
UBE2D4Q9Y2X8 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
UBE2D4Q9Y2X8 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
UBE2D4Q9Y2X8 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
UBE2D4Q9Y2X8 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC11.01□□□□□ -0.65
UBE2D4Q9Y2X8 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC11.01□□□□□ -0.65
UBE2D4Q9Y2X8 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
UBE2D4Q9Y2X8 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
UBE2D4Q9Y2X8 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
UBE2D4Q9Y2X8 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
UBE2D4Q9Y2X8 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC11.01□□□□□ -0.65
UBE2D4Q9Y2X8 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
UBE2D4Q9Y2X8 NARF-206ENST00000457415 1668 ntTSL 5 BASIC11.01□□□□□ -0.65
UBE2D4Q9Y2X8 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
UBE2D4Q9Y2X8 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
UBE2D4Q9Y2X8 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
UBE2D4Q9Y2X8 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
UBE2D4Q9Y2X8 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC11.01□□□□□ -0.65
UBE2D4Q9Y2X8 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC11□□□□□ -0.65
UBE2D4Q9Y2X8 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC11□□□□□ -0.65
UBE2D4Q9Y2X8 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UBE2D4Q9Y2X8 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
UBE2D4Q9Y2X8 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UBE2D4Q9Y2X8 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UBE2D4Q9Y2X8 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC11□□□□□ -0.65
UBE2D4Q9Y2X8 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC11□□□□□ -0.65
UBE2D4Q9Y2X8 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UBE2D4Q9Y2X8 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC11□□□□□ -0.65
UBE2D4Q9Y2X8 ZBED1P1-201ENST00000502364 1930 ntBASIC11□□□□□ -0.65
UBE2D4Q9Y2X8 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC11□□□□□ -0.65
UBE2D4Q9Y2X8 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UBE2D4Q9Y2X8 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC11□□□□□ -0.65
UBE2D4Q9Y2X8 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC11□□□□□ -0.65
UBE2D4Q9Y2X8 AL359258.3-201ENST00000622910 2331 ntBASIC11□□□□□ -0.65
UBE2D4Q9Y2X8 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC11□□□□□ -0.65
UBE2D4Q9Y2X8 SBF1P1-201ENST00000444527 5631 ntBASIC11□□□□□ -0.65
UBE2D4Q9Y2X8 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
UBE2D4Q9Y2X8 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC11□□□□□ -0.65
UBE2D4Q9Y2X8 AC098859.1-201ENST00000502915 1238 ntBASIC11□□□□□ -0.65
UBE2D4Q9Y2X8 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC11□□□□□ -0.65
UBE2D4Q9Y2X8 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
UBE2D4Q9Y2X8 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC11□□□□□ -0.65
UBE2D4Q9Y2X8 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
UBE2D4Q9Y2X8 AL121912.1-201ENST00000603683 238 ntBASIC11□□□□□ -0.65
UBE2D4Q9Y2X8 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC11□□□□□ -0.65
UBE2D4Q9Y2X8 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC11□□□□□ -0.65
UBE2D4Q9Y2X8 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC11□□□□□ -0.65
UBE2D4Q9Y2X8 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC11□□□□□ -0.65
UBE2D4Q9Y2X8 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UBE2D4Q9Y2X8 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UBE2D4Q9Y2X8 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC11□□□□□ -0.65
UBE2D4Q9Y2X8 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
UBE2D4Q9Y2X8 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
UBE2D4Q9Y2X8 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC11□□□□□ -0.65
UBE2D4Q9Y2X8 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC11□□□□□ -0.65
UBE2D4Q9Y2X8 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC11□□□□□ -0.65
UBE2D4Q9Y2X8 AJ011931.1-201ENST00000618749 2492 ntBASIC11□□□□□ -0.65
UBE2D4Q9Y2X8 GRK6P1-201ENST00000400595 1711 ntBASIC11□□□□□ -0.65
UBE2D4Q9Y2X8 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC11□□□□□ -0.65
UBE2D4Q9Y2X8 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC11□□□□□ -0.65
UBE2D4Q9Y2X8 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
UBE2D4Q9Y2X8 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC11□□□□□ -0.65
UBE2D4Q9Y2X8 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC11□□□□□ -0.65
UBE2D4Q9Y2X8 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
UBE2D4Q9Y2X8 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
UBE2D4Q9Y2X8 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC11□□□□□ -0.65
UBE2D4Q9Y2X8 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
UBE2D4Q9Y2X8 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC11□□□□□ -0.65
UBE2D4Q9Y2X8 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC11□□□□□ -0.65
UBE2D4Q9Y2X8 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
UBE2D4Q9Y2X8 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
UBE2D4Q9Y2X8 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
UBE2D4Q9Y2X8 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
UBE2D4Q9Y2X8 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC10.99□□□□□ -0.65
UBE2D4Q9Y2X8 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
UBE2D4Q9Y2X8 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
UBE2D4Q9Y2X8 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
UBE2D4Q9Y2X8 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
UBE2D4Q9Y2X8 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
UBE2D4Q9Y2X8 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
UBE2D4Q9Y2X8 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms