Protein–RNA interactions for Protein: Q9UJ98

STAG3, Cohesin subunit SA-3, humanhuman

Predictions only

Length 1,225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG3Q9UJ98 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC22.39■■□□□ 1.17
STAG3Q9UJ98 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC22.39■■□□□ 1.17
STAG3Q9UJ98 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC22.39■■□□□ 1.17
STAG3Q9UJ98 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC22.39■■□□□ 1.17
STAG3Q9UJ98 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
STAG3Q9UJ98 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
STAG3Q9UJ98 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
STAG3Q9UJ98 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
STAG3Q9UJ98 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
STAG3Q9UJ98 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC22.39■■□□□ 1.17
STAG3Q9UJ98 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
STAG3Q9UJ98 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC22.38■■□□□ 1.17
STAG3Q9UJ98 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
STAG3Q9UJ98 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
STAG3Q9UJ98 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
STAG3Q9UJ98 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC22.38■■□□□ 1.17
STAG3Q9UJ98 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
STAG3Q9UJ98 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
STAG3Q9UJ98 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
STAG3Q9UJ98 MIR769-201ENST00000390225 118 ntBASIC22.38■■□□□ 1.17
STAG3Q9UJ98 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
STAG3Q9UJ98 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
STAG3Q9UJ98 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
STAG3Q9UJ98 CYP46A4P-201ENST00000414953 267 ntBASIC22.38■■□□□ 1.17
STAG3Q9UJ98 IMP3P2-201ENST00000489760 475 ntBASIC22.38■■□□□ 1.17
STAG3Q9UJ98 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC22.38■■□□□ 1.17
STAG3Q9UJ98 AC245884.6-201ENST00000515672 1067 ntBASIC22.38■■□□□ 1.17
STAG3Q9UJ98 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC22.38■■□□□ 1.17
STAG3Q9UJ98 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC22.38■■□□□ 1.17
STAG3Q9UJ98 AC092068.1-201ENST00000592525 454 ntTSL 2 BASIC22.38■■□□□ 1.17
STAG3Q9UJ98 UBL5-208ENST00000593087 320 ntTSL 3 BASIC22.38■■□□□ 1.17
STAG3Q9UJ98 AC007663.3-201ENST00000609632 465 ntBASIC22.38■■□□□ 1.17
STAG3Q9UJ98 CU633904.3-201ENST00000624042 1029 ntBASIC22.38■■□□□ 1.17
STAG3Q9UJ98 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC22.38■■□□□ 1.17
STAG3Q9UJ98 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
STAG3Q9UJ98 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
STAG3Q9UJ98 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
STAG3Q9UJ98 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC22.38■■□□□ 1.17
STAG3Q9UJ98 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC22.38■■□□□ 1.17
STAG3Q9UJ98 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
STAG3Q9UJ98 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
STAG3Q9UJ98 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC22.37■■□□□ 1.17
STAG3Q9UJ98 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
STAG3Q9UJ98 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
STAG3Q9UJ98 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
STAG3Q9UJ98 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC22.37■■□□□ 1.17
STAG3Q9UJ98 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
STAG3Q9UJ98 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC22.37■■□□□ 1.17
STAG3Q9UJ98 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
STAG3Q9UJ98 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
STAG3Q9UJ98 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
STAG3Q9UJ98 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
STAG3Q9UJ98 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC22.37■■□□□ 1.17
STAG3Q9UJ98 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
STAG3Q9UJ98 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
STAG3Q9UJ98 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
STAG3Q9UJ98 KRTAP4-4-201ENST00000390661 1081 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
STAG3Q9UJ98 TISP43-201ENST00000409793 538 ntTSL 4 BASIC22.37■■□□□ 1.17
STAG3Q9UJ98 AC079178.1-201ENST00000420915 656 ntBASIC22.37■■□□□ 1.17
STAG3Q9UJ98 HNRNPA1P63-201ENST00000427917 963 ntBASIC22.37■■□□□ 1.17
STAG3Q9UJ98 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC22.37■■□□□ 1.17
STAG3Q9UJ98 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC22.37■■□□□ 1.17
STAG3Q9UJ98 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC22.37■■□□□ 1.17
STAG3Q9UJ98 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC22.37■■□□□ 1.17
STAG3Q9UJ98 MIR4706-201ENST00000582134 82 ntBASIC22.37■■□□□ 1.17
STAG3Q9UJ98 AC097724.1-201ENST00000609581 426 ntBASIC22.37■■□□□ 1.17
STAG3Q9UJ98 AC138649.2-201ENST00000615886 705 ntBASIC22.37■■□□□ 1.17
STAG3Q9UJ98 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
STAG3Q9UJ98 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
STAG3Q9UJ98 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC22.37■■□□□ 1.17
STAG3Q9UJ98 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
STAG3Q9UJ98 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
STAG3Q9UJ98 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
STAG3Q9UJ98 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
STAG3Q9UJ98 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC22.37■■□□□ 1.17
STAG3Q9UJ98 LRRC59-203ENST00000576448 1531 ntBASIC22.36■■□□□ 1.17
STAG3Q9UJ98 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
STAG3Q9UJ98 NDUFAB1P1-201ENST00000404262 460 ntBASIC22.36■■□□□ 1.17
STAG3Q9UJ98 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC22.36■■□□□ 1.17
STAG3Q9UJ98 AL133466.1-201ENST00000447582 150 ntBASIC22.36■■□□□ 1.17
STAG3Q9UJ98 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC22.36■■□□□ 1.17
STAG3Q9UJ98 COX5BP1-201ENST00000507622 393 ntBASIC22.36■■□□□ 1.17
STAG3Q9UJ98 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC22.36■■□□□ 1.17
STAG3Q9UJ98 MIR4722-201ENST00000578292 60 ntBASIC22.36■■□□□ 1.17
STAG3Q9UJ98 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC22.36■■□□□ 1.17
STAG3Q9UJ98 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC22.36■■□□□ 1.17
STAG3Q9UJ98 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC22.36■■□□□ 1.17
STAG3Q9UJ98 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC22.36■■□□□ 1.17
STAG3Q9UJ98 AC244157.2-201ENST00000616239 1006 ntBASIC22.36■■□□□ 1.17
STAG3Q9UJ98 AC091812.3-201ENST00000621362 345 ntBASIC22.36■■□□□ 1.17
STAG3Q9UJ98 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC22.36■■□□□ 1.17
STAG3Q9UJ98 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC22.36■■□□□ 1.17
STAG3Q9UJ98 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
STAG3Q9UJ98 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
STAG3Q9UJ98 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
STAG3Q9UJ98 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
STAG3Q9UJ98 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
STAG3Q9UJ98 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
STAG3Q9UJ98 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
STAG3Q9UJ98 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms