Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
PCDHB16Q9NRJ7 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.81□□□□□ -0.2
PCDHB16Q9NRJ7 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
PCDHB16Q9NRJ7 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
PCDHB16Q9NRJ7 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
PCDHB16Q9NRJ7 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
PCDHB16Q9NRJ7 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
PCDHB16Q9NRJ7 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
PCDHB16Q9NRJ7 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PCDHB16Q9NRJ7 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCDHB16Q9NRJ7 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCDHB16Q9NRJ7 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
PCDHB16Q9NRJ7 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PCDHB16Q9NRJ7 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC13.8□□□□□ -0.2
PCDHB16Q9NRJ7 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCDHB16Q9NRJ7 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
PCDHB16Q9NRJ7 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.8□□□□□ -0.2
PCDHB16Q9NRJ7 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCDHB16Q9NRJ7 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCDHB16Q9NRJ7 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCDHB16Q9NRJ7 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC13.8□□□□□ -0.2
PCDHB16Q9NRJ7 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCDHB16Q9NRJ7 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC13.8□□□□□ -0.2
PCDHB16Q9NRJ7 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCDHB16Q9NRJ7 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCDHB16Q9NRJ7 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.8□□□□□ -0.2
PCDHB16Q9NRJ7 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCDHB16Q9NRJ7 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCDHB16Q9NRJ7 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCDHB16Q9NRJ7 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCDHB16Q9NRJ7 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCDHB16Q9NRJ7 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCDHB16Q9NRJ7 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCDHB16Q9NRJ7 MRPL3P1-201ENST00000400109 1033 ntBASIC13.8□□□□□ -0.2
PCDHB16Q9NRJ7 FALEC-201ENST00000416894 566 ntTSL 3 BASIC13.8□□□□□ -0.2
PCDHB16Q9NRJ7 AC026396.1-201ENST00000419388 421 ntBASIC13.8□□□□□ -0.2
PCDHB16Q9NRJ7 AC140658.5-201ENST00000438532 169 ntBASIC13.8□□□□□ -0.2
PCDHB16Q9NRJ7 AC098831.1-202ENST00000438821 336 ntBASIC13.8□□□□□ -0.2
PCDHB16Q9NRJ7 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC13.8□□□□□ -0.2
PCDHB16Q9NRJ7 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCDHB16Q9NRJ7 AC079776.4-201ENST00000511039 504 ntBASIC13.8□□□□□ -0.2
PCDHB16Q9NRJ7 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC13.8□□□□□ -0.2
PCDHB16Q9NRJ7 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PCDHB16Q9NRJ7 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC13.8□□□□□ -0.2
PCDHB16Q9NRJ7 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC13.8□□□□□ -0.2
PCDHB16Q9NRJ7 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC13.8□□□□□ -0.2
PCDHB16Q9NRJ7 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC13.8□□□□□ -0.2
PCDHB16Q9NRJ7 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC13.8□□□□□ -0.2
PCDHB16Q9NRJ7 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCDHB16Q9NRJ7 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCDHB16Q9NRJ7 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCDHB16Q9NRJ7 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCDHB16Q9NRJ7 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC13.8□□□□□ -0.2
PCDHB16Q9NRJ7 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCDHB16Q9NRJ7 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCDHB16Q9NRJ7 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.8□□□□□ -0.2
PCDHB16Q9NRJ7 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCDHB16Q9NRJ7 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PCDHB16Q9NRJ7 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.8□□□□□ -0.2
PCDHB16Q9NRJ7 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCDHB16Q9NRJ7 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCDHB16Q9NRJ7 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PCDHB16Q9NRJ7 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC13.8□□□□□ -0.2
PCDHB16Q9NRJ7 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.8□□□□□ -0.2
PCDHB16Q9NRJ7 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PCDHB16Q9NRJ7 AC023157.3-201ENST00000619086 2088 ntBASIC13.79□□□□□ -0.2
PCDHB16Q9NRJ7 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PCDHB16Q9NRJ7 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.79□□□□□ -0.2
PCDHB16Q9NRJ7 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PCDHB16Q9NRJ7 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PCDHB16Q9NRJ7 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC13.79□□□□□ -0.2
PCDHB16Q9NRJ7 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.79□□□□□ -0.2
PCDHB16Q9NRJ7 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.79□□□□□ -0.2
PCDHB16Q9NRJ7 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
PCDHB16Q9NRJ7 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
PCDHB16Q9NRJ7 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PCDHB16Q9NRJ7 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PCDHB16Q9NRJ7 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
PCDHB16Q9NRJ7 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC13.79□□□□□ -0.2
PCDHB16Q9NRJ7 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PCDHB16Q9NRJ7 DDT-204ENST00000404092 805 ntTSL 3 BASIC13.79□□□□□ -0.2
PCDHB16Q9NRJ7 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
PCDHB16Q9NRJ7 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PCDHB16Q9NRJ7 HCG4B-203ENST00000450128 991 ntBASIC13.79□□□□□ -0.2
PCDHB16Q9NRJ7 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
PCDHB16Q9NRJ7 AC009078.2-202ENST00000463353 338 ntBASIC13.79□□□□□ -0.2
PCDHB16Q9NRJ7 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC13.79□□□□□ -0.2
PCDHB16Q9NRJ7 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC13.79□□□□□ -0.2
PCDHB16Q9NRJ7 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC13.79□□□□□ -0.2
PCDHB16Q9NRJ7 AC024267.1-201ENST00000582320 895 ntBASIC13.79□□□□□ -0.2
PCDHB16Q9NRJ7 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC13.79□□□□□ -0.2
PCDHB16Q9NRJ7 MIR7706-201ENST00000613747 67 ntBASIC13.79□□□□□ -0.2
PCDHB16Q9NRJ7 AC148477.8-201ENST00000624298 468 ntBASIC13.79□□□□□ -0.2
PCDHB16Q9NRJ7 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.79□□□□□ -0.2
PCDHB16Q9NRJ7 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.79□□□□□ -0.2
PCDHB16Q9NRJ7 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PCDHB16Q9NRJ7 HLA-A-201ENST00000376802 1334 ntBASIC13.79□□□□□ -0.2
PCDHB16Q9NRJ7 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.79□□□□□ -0.2
PCDHB16Q9NRJ7 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
PCDHB16Q9NRJ7 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms