Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NXF3Q9H4D5 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
NXF3Q9H4D5 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.89■□□□□ 0.29
NXF3Q9H4D5 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NXF3Q9H4D5 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
NXF3Q9H4D5 PCDHA1-201ENST00000378133 2726 ntBASIC16.89■□□□□ 0.29
NXF3Q9H4D5 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NXF3Q9H4D5 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
NXF3Q9H4D5 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
NXF3Q9H4D5 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NXF3Q9H4D5 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
NXF3Q9H4D5 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NXF3Q9H4D5 TEX30-203ENST00000376022 828 ntTSL 2 BASIC16.89■□□□□ 0.29
NXF3Q9H4D5 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.89■□□□□ 0.29
NXF3Q9H4D5 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC16.89■□□□□ 0.29
NXF3Q9H4D5 AC093433.1-201ENST00000458048 571 ntBASIC16.89■□□□□ 0.29
NXF3Q9H4D5 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC16.89■□□□□ 0.29
NXF3Q9H4D5 GAPDHP40-201ENST00000505218 1006 ntBASIC16.89■□□□□ 0.29
NXF3Q9H4D5 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
NXF3Q9H4D5 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.89■□□□□ 0.29
NXF3Q9H4D5 AP001063.1-201ENST00000568332 529 ntBASIC16.89■□□□□ 0.29
NXF3Q9H4D5 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC16.89■□□□□ 0.29
NXF3Q9H4D5 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.89■□□□□ 0.29
NXF3Q9H4D5 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC16.89■□□□□ 0.29
NXF3Q9H4D5 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC16.89■□□□□ 0.29
NXF3Q9H4D5 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.89■□□□□ 0.29
NXF3Q9H4D5 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.89■□□□□ 0.29
NXF3Q9H4D5 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.89■□□□□ 0.29
NXF3Q9H4D5 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NXF3Q9H4D5 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.89■□□□□ 0.29
NXF3Q9H4D5 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.89■□□□□ 0.29
NXF3Q9H4D5 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.89■□□□□ 0.29
NXF3Q9H4D5 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
NXF3Q9H4D5 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
NXF3Q9H4D5 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.89■□□□□ 0.29
NXF3Q9H4D5 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
NXF3Q9H4D5 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
NXF3Q9H4D5 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
NXF3Q9H4D5 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.89■□□□□ 0.29
NXF3Q9H4D5 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
NXF3Q9H4D5 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
NXF3Q9H4D5 CICP13-201ENST00000422015 2789 ntBASIC16.89■□□□□ 0.29
NXF3Q9H4D5 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NXF3Q9H4D5 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NXF3Q9H4D5 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
NXF3Q9H4D5 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
NXF3Q9H4D5 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NXF3Q9H4D5 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NXF3Q9H4D5 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NXF3Q9H4D5 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NXF3Q9H4D5 AGER-206ENST00000375070 1463 ntTSL 5 BASIC16.88■□□□□ 0.29
NXF3Q9H4D5 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC16.88■□□□□ 0.29
NXF3Q9H4D5 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NXF3Q9H4D5 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NXF3Q9H4D5 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.88■□□□□ 0.29
NXF3Q9H4D5 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.88■□□□□ 0.29
NXF3Q9H4D5 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NXF3Q9H4D5 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
NXF3Q9H4D5 DOC2GP-204ENST00000639052 2548 ntBASIC16.88■□□□□ 0.29
NXF3Q9H4D5 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NXF3Q9H4D5 PDIA3P1-201ENST00000471856 1510 ntBASIC16.88■□□□□ 0.29
NXF3Q9H4D5 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NXF3Q9H4D5 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC16.88■□□□□ 0.29
NXF3Q9H4D5 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NXF3Q9H4D5 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NXF3Q9H4D5 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.88■□□□□ 0.29
NXF3Q9H4D5 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC16.88■□□□□ 0.29
NXF3Q9H4D5 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
NXF3Q9H4D5 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC16.88■□□□□ 0.29
NXF3Q9H4D5 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.88■□□□□ 0.29
NXF3Q9H4D5 AC009486.1-201ENST00000569860 813 ntBASIC16.88■□□□□ 0.29
NXF3Q9H4D5 NAA38-206ENST00000576384 424 ntTSL 2 BASIC16.88■□□□□ 0.29
NXF3Q9H4D5 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.88■□□□□ 0.29
NXF3Q9H4D5 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.88■□□□□ 0.29
NXF3Q9H4D5 AL022328.1-201ENST00000610050 478 ntBASIC16.88■□□□□ 0.29
NXF3Q9H4D5 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
NXF3Q9H4D5 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NXF3Q9H4D5 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NXF3Q9H4D5 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NXF3Q9H4D5 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NXF3Q9H4D5 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NXF3Q9H4D5 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NXF3Q9H4D5 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NXF3Q9H4D5 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NXF3Q9H4D5 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.87■□□□□ 0.29
NXF3Q9H4D5 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NXF3Q9H4D5 AC026691.1-201ENST00000602502 2017 ntBASIC16.87■□□□□ 0.29
NXF3Q9H4D5 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NXF3Q9H4D5 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NXF3Q9H4D5 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NXF3Q9H4D5 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NXF3Q9H4D5 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NXF3Q9H4D5 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.87■□□□□ 0.29
NXF3Q9H4D5 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
NXF3Q9H4D5 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NXF3Q9H4D5 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NXF3Q9H4D5 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.87■□□□□ 0.29
NXF3Q9H4D5 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NXF3Q9H4D5 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NXF3Q9H4D5 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms