Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SLIRPQ9GZT3 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC13.86□□□□□ -0.19
SLIRPQ9GZT3 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
SLIRPQ9GZT3 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
SLIRPQ9GZT3 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SLIRPQ9GZT3 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLIRPQ9GZT3 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.85□□□□□ -0.19
SLIRPQ9GZT3 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.85□□□□□ -0.19
SLIRPQ9GZT3 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLIRPQ9GZT3 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC13.85□□□□□ -0.19
SLIRPQ9GZT3 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLIRPQ9GZT3 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
SLIRPQ9GZT3 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
SLIRPQ9GZT3 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SLIRPQ9GZT3 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
SLIRPQ9GZT3 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
SLIRPQ9GZT3 AL591122.2-201ENST00000624125 1853 ntBASIC13.85□□□□□ -0.19
SLIRPQ9GZT3 AC126755.1-201ENST00000525846 6405 ntBASIC13.85□□□□□ -0.19
SLIRPQ9GZT3 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLIRPQ9GZT3 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLIRPQ9GZT3 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
SLIRPQ9GZT3 AC117947.1-201ENST00000427448 529 ntBASIC13.85□□□□□ -0.19
SLIRPQ9GZT3 LIN28AP1-201ENST00000429574 405 ntBASIC13.85□□□□□ -0.19
SLIRPQ9GZT3 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
SLIRPQ9GZT3 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC13.85□□□□□ -0.19
SLIRPQ9GZT3 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC13.85□□□□□ -0.19
SLIRPQ9GZT3 MTRF1LP2-201ENST00000506027 1122 ntBASIC13.85□□□□□ -0.19
SLIRPQ9GZT3 AC008550.1-201ENST00000511500 884 ntBASIC13.85□□□□□ -0.19
SLIRPQ9GZT3 AP002469.2-201ENST00000531724 424 ntBASIC13.85□□□□□ -0.19
SLIRPQ9GZT3 KRT8P26-201ENST00000534154 1276 ntBASIC13.85□□□□□ -0.19
SLIRPQ9GZT3 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC13.85□□□□□ -0.19
SLIRPQ9GZT3 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC13.85□□□□□ -0.19
SLIRPQ9GZT3 AC011498.5-201ENST00000592027 486 ntBASIC13.85□□□□□ -0.19
SLIRPQ9GZT3 GZMM-202ENST00000592501 941 ntTSL 3 BASIC13.85□□□□□ -0.19
SLIRPQ9GZT3 AL589182.2-201ENST00000619332 1049 ntBASIC13.85□□□□□ -0.19
SLIRPQ9GZT3 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
SLIRPQ9GZT3 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
SLIRPQ9GZT3 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SLIRPQ9GZT3 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLIRPQ9GZT3 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC13.85□□□□□ -0.19
SLIRPQ9GZT3 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
SLIRPQ9GZT3 HADH-202ENST00000403312 1752 ntTSL 5 BASIC13.85□□□□□ -0.19
SLIRPQ9GZT3 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC13.85□□□□□ -0.19
SLIRPQ9GZT3 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLIRPQ9GZT3 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLIRPQ9GZT3 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLIRPQ9GZT3 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SLIRPQ9GZT3 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLIRPQ9GZT3 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLIRPQ9GZT3 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SLIRPQ9GZT3 AC129492.6-201ENST00000611383 1305 ntBASIC13.85□□□□□ -0.19
SLIRPQ9GZT3 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.85□□□□□ -0.19
SLIRPQ9GZT3 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.85□□□□□ -0.19
SLIRPQ9GZT3 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SLIRPQ9GZT3 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
SLIRPQ9GZT3 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SLIRPQ9GZT3 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLIRPQ9GZT3 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.84□□□□□ -0.19
SLIRPQ9GZT3 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.84□□□□□ -0.19
SLIRPQ9GZT3 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.84□□□□□ -0.19
SLIRPQ9GZT3 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
SLIRPQ9GZT3 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
SLIRPQ9GZT3 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLIRPQ9GZT3 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SLIRPQ9GZT3 HAL-202ENST00000538703 2637 ntTSL 2 BASIC13.84□□□□□ -0.19
SLIRPQ9GZT3 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SLIRPQ9GZT3 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC13.84□□□□□ -0.19
SLIRPQ9GZT3 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLIRPQ9GZT3 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
SLIRPQ9GZT3 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.84□□□□□ -0.19
SLIRPQ9GZT3 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC13.84□□□□□ -0.19
SLIRPQ9GZT3 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.84□□□□□ -0.19
SLIRPQ9GZT3 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLIRPQ9GZT3 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC13.84□□□□□ -0.19
SLIRPQ9GZT3 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC13.84□□□□□ -0.19
SLIRPQ9GZT3 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SLIRPQ9GZT3 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLIRPQ9GZT3 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
SLIRPQ9GZT3 BX664615.1-201ENST00000443558 458 ntBASIC13.84□□□□□ -0.19
SLIRPQ9GZT3 ATP5G1P1-201ENST00000448724 379 ntBASIC13.84□□□□□ -0.19
SLIRPQ9GZT3 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SLIRPQ9GZT3 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SLIRPQ9GZT3 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC13.84□□□□□ -0.19
SLIRPQ9GZT3 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLIRPQ9GZT3 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
SLIRPQ9GZT3 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
SLIRPQ9GZT3 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC13.84□□□□□ -0.19
SLIRPQ9GZT3 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SLIRPQ9GZT3 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.84□□□□□ -0.19
SLIRPQ9GZT3 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC13.84□□□□□ -0.19
SLIRPQ9GZT3 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLIRPQ9GZT3 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLIRPQ9GZT3 AC018442.1-201ENST00000421439 2061 ntBASIC13.84□□□□□ -0.19
SLIRPQ9GZT3 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC13.84□□□□□ -0.19
SLIRPQ9GZT3 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
SLIRPQ9GZT3 AC015909.5-201ENST00000624336 2266 ntBASIC13.84□□□□□ -0.19
SLIRPQ9GZT3 AC012569.1-201ENST00000591191 1524 ntBASIC13.84□□□□□ -0.19
SLIRPQ9GZT3 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLIRPQ9GZT3 OR2I1P-209ENST00000641730 5365 ntBASIC13.84□□□□□ -0.19
SLIRPQ9GZT3 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms